Selection of biocatalysts for chemical synthesis

被引:70
作者
Fiet, SV [1 ]
van Beilen, JB [1 ]
Witholt, B [1 ]
机构
[1] ETH Honggerberg, Inst Biotechnol, CH-8093 Zurich, Switzerland
关键词
enzyme selection; reporter genes;
D O I
10.1073/pnas.0504733102
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
To determine whether microbial chemosensors can be used to find new or better biocatalysts, we constructed Escherichia coli hosts that recognize the product of a biocatalytic conversion through the transcriptional activator NahR and respond by expression of a lacZ or tetA reporter gene. Equipped with a benzaldehyde dehydrogenase (XyIC from Pseudomonas putida), the lacZ-based host responded to the oxidation of benzaldehyde and 2-hydroxybenzal-dehyde to the corresponding benzoic acids by forming blue colonies, whereas XyIC(-) cells did not. Similarly, the tetA-based host was able to grow under selective conditions only when equipped with XyIC, enabling selection of biocatalytically active cells in inactive populations at frequencies as low as 10(-6).
引用
收藏
页码:1693 / 1698
页数:6
相关论文
共 47 条
[1]   Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains [J].
Anantharaman, V ;
Koonin, EV ;
Aravind, L .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 307 (05) :1271-1292
[2]   Evolution of transcription factors and the gene regulatory network in Escherichia coli [J].
Babu, MM ;
Teichmann, SA .
NUCLEIC ACIDS RESEARCH, 2003, 31 (04) :1234-1244
[3]   Chemical complementation: A reaction-independent genetic assay for enzyme catalysis [J].
Baker, K ;
Bleczinski, C ;
Lin, HN ;
Salazar-Jimenez, G ;
Sengupta, D ;
Krane, S ;
Cornish, VW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (26) :16537-16542
[4]   Phenotypes of combined Tet repressor mutants for effector and operator recognition and allostery [J].
Bertram, R ;
Kraft, C ;
Wisshak, S ;
Mueller, J ;
Scholz, O ;
Hillen, W .
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY, 2004, 8 (02) :104-110
[5]   Xylene monooxygenase catalyzes the multistep oxygenation of toluene and pseudocumene to corresponding alcohols, aldehydes, and acids in Escherichia coli JM101 [J].
Bühler, B ;
Schmid, A ;
Hauer, B ;
Witholt, B .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (14) :10085-10092
[6]   Engineering a ligand-dependent RNA transcriptional activator [J].
Buskirk, AR ;
Landrigan, A ;
Liu, DR .
CHEMISTRY & BIOLOGY, 2004, 11 (08) :1157-1163
[7]   Effector specificity mutants of the transcriptional activator NahR of naphthalene degrading Pseudomonas define protein sites involved in binding of aromatic inducers [J].
Cebolla, A ;
Sousa, C ;
deLorenzo, V .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (07) :3986-3992
[8]   FACS-optimized mutants of the green fluorescent protein (GFP) [J].
Cormack, BP ;
Valdivia, RH ;
Falkow, S .
GENE, 1996, 173 (01) :33-38
[9]   Flow cytometric screening of cell-based libraries [J].
Daugherty, PS ;
Iverson, BL ;
Georgiou, G .
JOURNAL OF IMMUNOLOGICAL METHODS, 2000, 243 (1-2) :211-227
[10]   Deciphering the action of aromatic effectors on the prokaryotic enhancer-binding protein XyIR: a structural model of its N-terminal domain [J].
Devos, D ;
Garmendia, J ;
de Lorenzo, V ;
Valencia, A .
ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (01) :29-41