Pressure control using stochastic cell rescaling

被引:231
作者
Bernetti, Mattia [1 ]
Bussi, Giovanni [1 ]
机构
[1] Scuola Int Super Avanzati, Via Bonomea 265, I-34136 Trieste, Italy
关键词
MOLECULAR-DYNAMICS SIMULATIONS; CONSTANT-PRESSURE; ALGORITHM; WATER; SYSTEMS; CONSTRAINTS; HYDRATION; ENSEMBLE; CHARGES; MOTION;
D O I
10.1063/5.0020514
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Molecular dynamics simulations require barostats to be performed at a constant pressure. The usual recipe is to employ the Berendsen barostat first, which displays a first-order volume relaxation efficient in equilibration but results in incorrect volume fluctuations, followed by a second-order or a Monte Carlo barostat for production runs. In this paper, we introduce stochastic cell rescaling, a first-order barostat that samples the correct volume fluctuations by including a suitable noise term. The algorithm is shown to report volume fluctuations compatible with the isobaric ensemble and its anisotropic variant is tested on a membrane simulation. Stochastic cell rescaling can be straightforwardly implemented in the existing codes and can be used effectively in both equilibration and production phases.
引用
收藏
页数:12
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