Characterization of threonine side chain dynamics in an antifreeze protein using natural abundance 13C NMR spectroscopy

被引:10
作者
Daley, ME
Sykes, BD [1 ]
机构
[1] Univ Alberta, Dept Biochem, CIHR Grp Prot Struct & Funct, Edmonton, AB T6G 2H7, Canada
[2] Univ Alberta, Prot Engn Network Ctr Excellence, Edmonton, AB T6G 2H7, Canada
基金
加拿大健康研究院;
关键词
antifreeze protein; natural abundance C-13 NMR; side chain dynamics;
D O I
10.1023/B:JNMR.0000019250.02229.a8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The dynamics of threonine side chains of the Tenebrio molitor antifreeze protein (TmAFP) were investigated using natural abundance C-13 NMR. In TmAFP, the array of threonine residues on one face of the protein is responsible for conferring its ability to bind crystalline ice and inhibit its growth. Heteronuclear longitudinal and transverse relaxation rates and the {H-1}- C-13 NOE were determined in this study. The CalphaH relaxation measurements were compared to the previously measured N-15 backbone parameters and these are found to be in agreement. For the analysis of the threonine side chain motions, the model of restricted rotational diffusion about the chi(1) dihedral angle was employed [ London and Avitabile ( 1978) J. Am. Chem. Soc., 100, 7159 - 7165]. We demonstrate that the motion experienced by the ice binding threonine side chains is highly restricted, with an approximate upper limit of less than +/- 25degrees.
引用
收藏
页码:139 / 150
页数:12
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