Clinical Potentials of Methylator Phenotype in Stage 4 High-Risk Neuroblastoma: An Open Challenge

被引:10
作者
Banelli, Barbara [1 ]
Merlo, Domenico Franco [1 ]
Allemanni, Giorgio [1 ]
Forlani, Alessandra [1 ]
Romani, Massimo [1 ]
机构
[1] IRCCS AOU San Martino IST, Genoa, Italy
关键词
DNA METHYLATION; ABERRANT METHYLATION; GENE; CLASSIFICATION; CANCER;
D O I
10.1371/journal.pone.0063253
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Approximately 20% of stage 4 high-risk neuroblastoma patients are alive and disease-free 5 years after disease onset while the remaining experience rapid and fatal progression. Numerous findings underline the prognostic role of methylation of defined target genes in neuroblastoma without taking into account the clinical and biological heterogeneity of this disease. In this report we have investigated the methylation of the PCDHB cluster, the most informative member of the "Methylator Phenotype'' in neuroblastoma, hypothesizing that if this epigenetic mark can predict overall and progression free survival in high-risk stage 4 neuroblastoma, it could be utilized to improve the risk stratification of the patients, alone or in conjunction with the previously identified methylation of the SFN gene (14.3.3sigma) that can accurately predict outcome in these patients. We have utilized univariate and multivariate models to compare the prognostic power of PCDHB methylation in terms of overall and progression free survival, quantitatively determined by pyrosequencing, with that of other markers utilized for the patients' stratification utilizing methylation thresholds calculated on neuroblastoma at stage 1-4 and only on stage 4, high-risk patients. Our results indicate that PCDHB accurately distinguishes between high-and intermediate/low risk stage 4 neuroblastoma in agreement with the established risk stratification criteria. However PCDHB cannot predict outcome in the subgroup of stage 4 patients at high-risk whereas methylation levels of SFN are suggestive of a "methylation gradient'' associated with tumor aggressiveness as suggested by the finding of a higher threshold that defines a subset of patients with an extremely severe disease (OS <24 months). Because of the heterogeneity of neuroblastoma we believe that clinically relevant methylation markers should be selected and tested on homogeneous groups of patients rather than on patients at all stages.
引用
收藏
页数:8
相关论文
共 27 条
[1]  
Abe M, 2005, CANCER RES, V65, P828
[2]   Identification of genes targeted by CpG island methylator phenotype in neuroblastomas, and their possible integrative involvement in poor prognosis [J].
Abe, Masanobu ;
Watanabe, Naoko ;
McDonell, Nathalie ;
Takato, Tsuyoshi ;
Ohira, Miki ;
Nakagawara, Akira ;
Ushijima, Toshikazu .
ONCOLOGY, 2008, 74 (1-2) :50-60
[3]   Marked and independent prognostic significance of the CpG island methylator phenotype in neuroblastomas [J].
Abe, Masanobu ;
Westermann, Frank ;
Nakagawara, Akira ;
Takato, Tsuyoshi ;
Schwab, Manfred ;
Ushijima, Toshikazu .
CANCER LETTERS, 2007, 247 (02) :253-258
[4]   Clustering of gene hypermethylation associated with clinical risk groups in neuroblastoma [J].
Alaminos, M ;
Davalos, V ;
Cheung, NKV ;
Gerald, WL ;
Esteller, M .
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2004, 96 (16) :1208-1219
[5]   DNA methylation in neuroblastic tumors [J].
Banelli, B ;
Di Vinci, A ;
Gelvi, I ;
Casciano, I ;
Allemanni, G ;
Bonassi, S ;
Romani, M .
CANCER LETTERS, 2005, 228 (1-2) :37-41
[6]   Distinct CpG methylation profiles characterize different clinical groups of neuroblastic tumors [J].
Banelli, B ;
Gelvi, I ;
Di Vinci, A ;
Scaruffi, P ;
Casciano, I ;
Allemanni, G ;
Bonassi, S ;
Tonini, GP ;
Romani, M .
ONCOGENE, 2005, 24 (36) :5619-5628
[7]   A pyrosequencing assay for the quantitative methylation analysis of the PCDHB gene cluster, the major factor in neuroblastoma methylator phenotype [J].
Banelli, Barbara ;
Brigati, Claudio ;
Di Vinci, Angela ;
Casciano, Ida ;
Forlani, Alessandra ;
Borzi, Luana ;
Allemanni, Giorgio ;
Romani, Massimo .
LABORATORY INVESTIGATION, 2012, 92 (03) :458-465
[8]   Outcome prediction and risk assessment by quantitative pyrosequencing methylation analysis of the SFN gene in advanced stage, high-risk, neuroblastic tumor patients [J].
Banelli, Barbara ;
Bonassi, Stefano ;
Casciano, Ida ;
Mazzocco, Katia ;
Di Vinci, Angela ;
Scaruffi, Paola ;
Brigati, Claudio ;
Allemanni, Giorgio ;
Borzi, Luana ;
Tonini, Gian Paolo ;
Romani, Massimo .
INTERNATIONAL JOURNAL OF CANCER, 2010, 126 (03) :656-668
[9]   Neuroblastoma: Biological insights into a clinical enigma [J].
Brodeur, GM .
NATURE REVIEWS CANCER, 2003, 3 (03) :203-216
[10]   The International Neuroblastoma Risk Group (INRG) Classification System: An INRG Task Force Report [J].
Cohn, Susan L. ;
Pearson, Andrew D. J. ;
London, Wendy B. ;
Monclair, Tom ;
Ambros, Peter F. ;
Brodeur, Garrett M. ;
Faldum, Andreas ;
Hero, Barbara ;
Iehara, Tomoko ;
Machin, David ;
Mosseri, Veronique ;
Simon, Thorsten ;
Garaventa, Alberto ;
Castel, Victoria ;
Matthay, Katherine K. .
JOURNAL OF CLINICAL ONCOLOGY, 2009, 27 (02) :289-297