Pan-cancer analysis reveals NAA50 as a cancer prognosis and immune infiltration-related biomarker

被引:8
作者
Fang, Tao [1 ]
Wang, Dingxin [1 ]
Li, Rongyang [1 ]
Yu, Wenhao [1 ]
Tian, Hui [1 ]
机构
[1] Shandong Univ, Qilu Hosp, Dept Thorac Surg, Jinan, Shandong, Peoples R China
关键词
lung adenocarcinoma (LUAD); N-alpha-acetyltransferase 50 (NAA50); pan-cancer analysis; immune infiltration; biomarker; N-TERMINAL ACETYLTRANSFERASES; TARGETING CELL-CYCLE;
D O I
10.3389/fgene.2022.1035337
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: N-Alpha-Acetyltransferase 50 (NAA50) has acetyltransferase activity and is important for chromosome segregation. However, the function and mechanism of NAA50 expression in cancer development was still unclear. Here, we systematically researched the function and mechanism of NAA50 in pan-cancer, and further verified the results of NAA50 in lung adenocarcinoma (LUAD). Methods: In this study, using the online databases TIMER2.0, SangerBox3.0, HPA, UCSC, GEPIA, cBioPortal, UALCAN, TISIDB, CancerSEA and LinkedOmics, we focused on the relevance between NAA50 and oncogenesis, progression, methylation, immune infiltration, function and prognosis. In addition, the proliferation of cells was detected by CCK-8 and Edu assay. Finally, we analyzed the relationship between the expression of NAA50 and cell cycle related proteins. Results: Pan-cancer analysis indicated that NAA50 was overexpressed in most cancers. And there was a significant correlation between NAA50 expression and the prognosis of cancer patients. In the meantime, NAA50 gene changes occur in a variety of tumors. Compared with normal tissues, the methylation level of NAA50 promoter increased in most cancer tissues. In addition, the results exhibited that in most cancers, NAA50 was significantly positively correlated with bone myeloid-derived suppressor cell (MDSC) infiltration and negatively correlated with T cell NK infiltration. Moreover, functional enrichment indicated that NAA50 regulates cell cycle and proliferation in LUAD. In vitro experiments testified that knockout of NAA50 could significantly inhibit the proliferation of LUAD. Conclusion: NAA50 may be a potential biomarker and oncogene of pan-cancer, especially LUAD, which may promote the occurrence and development of tumors through different mechanisms. Furthermore, NAA50 was bound up with to immune cell infiltration in pan-cancer, meaning NAA50 may be an important therapeutic target for human cancers.
引用
收藏
页数:15
相关论文
共 37 条
[11]   Human Naa50p (Nat5/San) Displays Both Protein Nα- and Nε-Acetyltransferase Activity [J].
Evjenth, Rune ;
Hole, Kristine ;
Karlsen, Odd A. ;
Ziegler, Mathias ;
Arnesen, Thomas ;
Lillehaug, Johan R. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (45) :31122-31129
[12]   Pan-Cancer and Single-Cell Analysis Reveals CENPL as a Cancer Prognosis and Immune Infiltration-Related Biomarker [J].
Feng, Ziyang ;
Chen, Yu ;
Cai, Changjing ;
Tan, Jun ;
Liu, Ping ;
Chen, Yihong ;
Shen, Hong ;
Zeng, Shan ;
Han, Ying .
FRONTIERS IN IMMUNOLOGY, 2022, 13
[13]   Myeloid-Derived Suppressor Cells [J].
Gabrilovich, Dmitry I. .
CANCER IMMUNOLOGY RESEARCH, 2017, 5 (01) :3-8
[14]   Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates [J].
Grunwald, Stephan ;
Hopf, Linus V. M. ;
Bock-Bierbaum, Tobias ;
Lally, Ciara C. M. ;
Spahn, Christian M. T. ;
Daumke, Oliver .
NATURE COMMUNICATIONS, 2020, 11 (01)
[15]   Heterogeneity of the tumor immune microenvironment and its clinical relevance [J].
Jia, Qingzhu ;
Wang, Aoyun ;
Yuan, Yixiao ;
Zhu, Bo ;
Long, Haixia .
EXPERIMENTAL HEMATOLOGY & ONCOLOGY, 2022, 11 (01)
[16]   DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load [J].
Jung, Hyunchul ;
Kim, Hong Sook ;
Kim, Jeong Yeon ;
Sun, Jong-Mu ;
Ahn, Jin Seok ;
Ahn, Myung-Ju ;
Park, Keunchil ;
Esteller, Manel ;
Lee, Se-Hoon ;
Choi, Jung Kyoon .
NATURE COMMUNICATIONS, 2019, 10 (1)
[17]   Protein N-terminal acetyltransferases in cancer [J].
Kalvik, T. V. ;
Arnesen, T. .
ONCOGENE, 2013, 32 (03) :269-276
[18]   NAA10 as a New Prognostic Marker for Cancer Progression [J].
Kim, Sun Myung ;
Ha, Eunyoung ;
Kim, Jinyoung ;
Cho, Chiheum ;
Shin, So-Jin ;
Seo, Ji Hae .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (21) :1-15
[19]   CDK/cyclin dependencies define extreme cancer cell-cycle heterogeneity and collateral vulnerabilities [J].
Knudsen, Erik S. ;
Kumarasamy, Vishnu ;
Nambiar, Ram ;
Pearson, Joel D. ;
Vail, Paris ;
Rosenheck, Hanna ;
Wang, Jianxin ;
Eng, Kevin ;
Bremner, Rod ;
Schramek, Daniel ;
Rubin, Seth M. ;
Welm, Alana L. ;
Witkiewicz, Agnieszka K. .
CELL REPORTS, 2022, 38 (09)
[20]   Identification of NAA40 as a Potential Prognostic Marker for Aggressive Liver Cancer Subtypes [J].
Koufaris, Costas ;
Kirmizis, Antonis .
FRONTIERS IN ONCOLOGY, 2021, 11