Planctomonas deserti gen. nov., sp. nov., a new member of the family Microbacteriaceae isolated from soil of the Taklamakan desert

被引:7
|
作者
Liu, Shao-Wei [1 ,2 ]
Li, Fei-Na [1 ,2 ]
Zheng, Hong-Yun [1 ,2 ,3 ]
Qi, Xin [1 ,2 ]
Huang, Da-Lin [3 ]
Xie, Yun-Ying [1 ,2 ]
Sun, Cheng-Hang [1 ,2 ]
机构
[1] Chinese Acad Med Sci, Inst Med Biotechnol, Beijing 100050, Peoples R China
[2] Peking Union Med Coll, Beijing 100050, Peoples R China
[3] Guilin Med Univ, Coll Basic Med Sci, Guilin 541004, Peoples R China
关键词
Planctomonas deserti; Microbacteriaceae; actinobacteria; taxonomy; strain 13S1-3(T); EMENDED DESCRIPTION; SUBSP NOV; ACTINOBACTERIUM; CLAVIBACTER; ACID; PEPTIDOGLYCAN; PROPOSAL; RECLASSIFICATION; CLASSIFICATION; IDENTIFICATION;
D O I
10.1099/ijsem.0.003095
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-positive, aerobic, irregular coccoid- to ovoid-shaped, non-spore-forming and motile bacterium, designated strain 13S1-3(T), was isolated from a soil sample from the rhizosphere of Tamarix collected in the Taklamakan desert in Xinjiang Uygur Autonomous Region, PR China. The strain was examined by a polyphasic approach to clarify its taxonomic position. Strain 13S1-3(T) grew optimally at 28-30 degrees C, pH 7.0 and with 0-1 % (w/v) NaCl. The cell-wall peptidoglycan was of the B2 gamma type and contained D-alanine, D-glutamic acid, glycine, D-2,4-diaminobutyric acid and L-2,4-diaminobutyric acid. Ribose, xylose, glucose and galactose were detected as cell-wall sugars. The acyl type of the muramic acid was acetyl. The predominant menaquinones were MK-12, MK-11, MK-13 and MK-10. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, two unidentified glycolipids and one unidentified phospholipid. The major whole-cell fatty acids were anteiso-C-15:0, anteiso-C-17:0 and iso-C-16:0. The DNA G+C content was 70.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that 13S1-3(T) represented a member of the family Microbacteriaceae and showed the highest level of 16S rRNA gene sequence similarity with Frondihabitans australicus E1HC-02(T) (97.11 %). Phylogenetic trees revealed that 13S1-3(T) formed a distinct lineage with respect to closely related genera within the family Microbacteriaceae. On the basis of the results of phylogenetic, phenotypic and chemotaxonomic analyses, 13S1-3(T) is distinguishable from phylogenetically related genera in the family Microbacteriaceae, and represents a novel species of a new genus, for which the name Planctomonas deserti gen. nov., sp. nov. is proposed. The type strain is 13S1-3(T) (=KCTC 49115(T) =CGMCC 1.16554(T)).
引用
收藏
页码:616 / 624
页数:9
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