Identification of human rotavirus strains with the P[14] genotype by PCR

被引:28
作者
Arista, S
Vizzi, E
Alaimo, C
Palermo, D
Cascio, A
机构
[1] Univ Palermo, Dipartimento Igine & Microbiol, I-90127 Palermo, Italy
[2] Univ Palermo, Osped Bambini G Di Cristina, Ist Patol Infettiva & Virol, Palermo, Italy
关键词
D O I
10.1128/JCM.37.8.2706-2708.1999
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A seminested PCR typing assay has been extended to identify rotavirus strains with the P[14] genotype. The specificity of the method was confirmed by Southern hybridization and by restriction analysis with the enzyme AluI. One out of four human rotavirus (HRV) strains with unusual subgroup-electropherotype linkage but none out of 50 HRV strains with usual linkage was typed as P[14].
引用
收藏
页码:2706 / 2708
页数:3
相关论文
共 14 条
[1]  
ARISTA S, 1986, European Journal of Epidemiology, V2, P104, DOI 10.1007/BF00157019
[2]   ELECTROPHEROTYPES, SUBGROUPS AND SEROTYPES OF HUMAN ROTAVIRUS STRAINS CAUSING GASTROENTERITIS IN INFANTS AND YOUNG-CHILDREN IN PALERMO, ITALY, FROM 1985 TO 1989 [J].
ARISTA, S ;
GIOVANNELLI, L ;
PISTOIA, D ;
CASCIO, A ;
PAREA, M ;
GERNA, G .
RESEARCH IN VIROLOGY, 1990, 141 (04) :435-448
[3]   Comparative amino acid sequence analysis of the outer capsid protein VP4 from four lapine rotavirus strains reveals identity with genotype P[14] human rotaviruses [J].
Ciarlet, M ;
Estes, MK ;
Conner, ME .
ARCHIVES OF VIROLOGY, 1997, 142 (05) :1059-1069
[4]   IDENTIFICATION OF GROUP-A ROTAVIRUS GENE-4 TYPES BY POLYMERASE CHAIN-REACTION [J].
GENTSCH, JR ;
GLASS, RI ;
WOODS, P ;
GOUVEA, V ;
GORZIGLIA, M ;
FLORES, J ;
DAS, BK ;
BHAN, MK .
JOURNAL OF CLINICAL MICROBIOLOGY, 1992, 30 (06) :1365-1373
[5]   Review of G and P typing results from a global collection of rotavirus strains: Implications for vaccine development [J].
Gentsch, JR ;
Woods, PA ;
Ramachandran, M ;
Das, BK ;
Leite, JP ;
Alfieri, A ;
Kumar, R ;
Bhan, MK ;
Glass, RI .
JOURNAL OF INFECTIOUS DISEASES, 1996, 174 :S30-S36
[6]   ISOLATION AND CHARACTERIZATION OF 2 DISTINCT HUMAN ROTAVIRUS STRAINS WITH G6 SPECIFICITY [J].
GERNA, G ;
SARASINI, A ;
PAREA, M ;
ARISTA, S ;
MIRANDA, P ;
BRUSSOW, H ;
HOSHINO, Y ;
FLORES, J .
JOURNAL OF CLINICAL MICROBIOLOGY, 1992, 30 (01) :9-16
[7]   IDENTIFICATION OF A NEW VP4 SEROTYPE OF HUMAN ROTAVIRUSES [J].
GERNA, G ;
SEARS, J ;
HOSHINO, Y ;
STEELE, AD ;
NAKAGOMI, O ;
SARASINI, A ;
FLORES, J .
VIROLOGY, 1994, 200 (01) :66-71
[8]  
HELMUTH R, 1990, PCR PROTOCOLS GUIDE, P119
[9]   THE DISTRIBUTION OF G(VP7) AND P(VP4) SEROTYPES AMONG HUMAN ROTAVIRUSES RECOVERED FROM JAPANESE CHILDREN WITH DIARRHEA [J].
KAGA, E ;
IIZUKA, M ;
NAKAGOMI, T ;
NAKAGOMI, O .
MICROBIOLOGY AND IMMUNOLOGY, 1994, 38 (04) :317-320
[10]   RELATIVE FREQUENCY OF HUMAN ROTAVIRUS VP4 (P)-GENOTYPES RECOVERED OVER A 10-YEAR PERIOD FROM SOUTH-AFRICAN CHILDREN WITH DIARRHEA [J].
MPHAHLELE, MJ ;
STEELE, AD .
JOURNAL OF MEDICAL VIROLOGY, 1995, 47 (01) :1-5