Identification of differential expression genes associated with host selection and adaptation between two sibling insect species by transcriptional profile analysis

被引:24
|
作者
Li, Haichao [1 ,2 ]
Zhang, Hao [1 ,2 ]
Guan, Ruobing [1 ,2 ]
Miao, Xuexia [1 ]
机构
[1] Chinese Acad Sci, Shanghai Inst Biol Sci, Inst Plant Physiol & Ecol, Key Lab Insect Dev & Evolutionary Biol, Shanghai 200032, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
来源
BMC GENOMICS | 2013年 / 14卷
关键词
Development; Host plant range; Transcripts; Digital gene expression tag profile (DGE-Tag); Sibling species; Differential expression gene; Helicoverpa armigera; Helicoverpa assulta; COTTON BOLLWORM; HELICOVERPA-ARMIGERA; OLFACTORY RECEPTORS; BINDING PROTEINS; SERIAL ANALYSIS; LEPIDOPTERA; ASSULTA; ANNOTATION; RESISTANCE; NOCTUIDAE;
D O I
10.1186/1471-2164-14-582
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Cotton bollworm (Helicoverpa armigera) and oriental tobacco budworm (Helicoverpa assulta) are noctuid sibling species. Under artificial manipulation, they can mate and produce fertile offspring. As serious agricultural insect pests, cotton bollworms are euryphagous insects, but oriental tobacco budworms are oligophagous insects. To identify the differentially expressed genes that affect host recognition and host adaptation between the two species, we constructed digital gene expression tag profiles for four developmental stages of the two species. High-throughput sequencing results indicated that we have got more than 23 million 17nt clean tags from both species, respectively. The number of unique clean tags was nearly same in both species (approximately 357,000). Results: According to the gene annotation results, we identified 83 and 68 olfaction related transcripts from H. armigera and H. assulta, respectively. At the same time, 1137 and 1138 transcripts of digestion enzymes were identified from the two species. Among the olfaction related transcripts, more odorant binding protein and G protein-coupled receptor were identified in H. armigera than in H. assulta. Among the digestion enzymes, there are more detoxification enzyme, e. g. P450, carboxypeptidase and ATPase in H. assulta than in H. armigera. These differences partially explain that because of the narrow host plant range of H. assulta, more detoxification enzymes would help them increase the food detoxification and utilization efficiency. Conclusions: This study supplied some differentially expressed genes affecting host selection and adaptation between the two sibling species. These genes will be useful information for studying on the evolution of host plant selection. It also provides some important target genes for insect species-specific control by RNAi technology.
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页数:12
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