Heterogeneous data fusion for brain tumor classification

被引:12
|
作者
Metsis, Vangelis [1 ]
Huang, Heng
Andronesi, Ovidiu C. [2 ,3 ,4 ]
Makedon, Fillia
Tzika, Aria [2 ,3 ,4 ]
机构
[1] Univ Texas Arlington, Dept Comp Sci & Engn, Heracleia Human Ctr Comp Lab, Arlington, TX 76019 USA
[2] Massachusetts Gen Hosp, Dept Surg, NMR Surg Lab, Boston, MA 02114 USA
[3] Harvard Univ, Sch Med, Shriners Burn Inst, Boston, MA 02114 USA
[4] Massachusetts Gen Hosp, Dept Radiol, Athinoula A Martinos Ctr Biomed Imaging, Boston, MA 02114 USA
关键词
data fusion; gene selection; bioinformatics; magnetic resonance spectroscopy; MAGNETIC-RESONANCE SPECTROSCOPY; MALIGNANT GLIOMAS; FEATURE-SELECTION; SURVIVAL;
D O I
10.3892/or.2012.1931
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Current research in biomedical informatics involves analysis of multiple heterogeneous data sets. This includes patient demographics, clinical and pathology data, treatment history, patient outcomes as well as gene expression, DNA sequences and other information sources such as gene ontology. Analysis of these data sets could lead to better disease diagnosis, prognosis, treatment and drug discovery. In this report, we present a novel machine learning framework for brain tumor classification based on heterogeneous data fusion of metabolic and molecular datasets, including state-of-the-art high-resolution magic angle spinning (HRMAS) proton (H-1) magnetic resonance spectroscopy and gene transcriptome profiling, obtained from intact brain tumor biopsies. Our experimental results show that our novel framework outperforms any analysis using individual dataset.
引用
收藏
页码:1413 / 1416
页数:4
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