The complete mitochondrial genome sequence of cabbage looper, Trichoplusia ni (Lepidoptera: Noctuidae)

被引:2
作者
Liu, Tingting [1 ]
Li, Zhaofei [1 ]
机构
[1] Northwest A&F Univ, Coll Plant Protect, Yangling 712100, Shaanxi, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词
Trichoplusia ni; mtDNA; mitochondrial genome; phylogenetic analysis;
D O I
10.1080/23802359.2019.1617063
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Trichoplusia ni is a polyphagous insect that feeds on many crops plants of economic importance. In this paper, we presented the complete mitochondrial genome of T. ni. The circular mitochondrial genome size is 15,239 bp, containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), two ribosome RNA genes (rRNA), and a control region of 1103 bp in length. The base composition of the genome is as follows: A of 38.9%, T of 41.6%, C of 11.5%, and G of 8.0%, with a total G + C content of the mitochondrial genome 19.5% and A + T of 80.5%. The phylogenetic Neighbour-Joining (NJ) tree was constructed to validate the taxonomic status of T. ni, exhibiting a closest relationship with Spodoptera litura and Spodoptera frugiperda. The research of the complete mitochondrial genome of Trichoplusia ni is able to provide a reference taxonomic relationships and more data of the insect for further.
引用
收藏
页码:2005 / 2007
页数:3
相关论文
共 10 条
[1]   Dialkoxybenzene and Dialkoxyallylbenzene Feeding and Oviposition Deterrents against the Cabbage Looper, Trichoplusia ni: Potential Insect Behavior Control Agents [J].
Akhtar, Yasmin ;
Yu, Yang ;
Isman, Murray B. ;
Plettner, Erika .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2010, 58 (08) :4983-4991
[2]   Topical application of a plant extract to different life stages of Trichoplusia ni fails to influence feeding or oviposition behaviour [J].
Akhtar, Yasmin ;
Shikano, Ikkei ;
Isman, Murray B. .
ENTOMOLOGIA EXPERIMENTALIS ET APPLICATA, 2009, 132 (03) :275-282
[3]   MITOS: Improved de novo metazoan mitochondrial genome annotation [J].
Bernt, Matthias ;
Donath, Alexander ;
Juehling, Frank ;
Externbrink, Fabian ;
Florentz, Catherine ;
Fritzsch, Guido ;
Puetz, Joern ;
Middendorf, Martin ;
Stadler, Peter F. .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319
[4]   Genetic analysis of cabbage loopers, Trichoplusia ni (Lepidoptera: Noctuidae), a seasonal migrant in western North America [J].
Franklin, Michelle T. ;
Ritland, Carol E. ;
Myers, Judith H. .
EVOLUTIONARY APPLICATIONS, 2011, 4 (01) :89-99
[5]   MAFFT version 5: improvement in accuracy of multiple sequence alignment [J].
Katoh, K ;
Kuma, K ;
Toh, H ;
Miyata, T .
NUCLEIC ACIDS RESEARCH, 2005, 33 (02) :511-518
[6]   MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms [J].
Kumar, Sudhir ;
Stecher, Glen ;
Li, Michael ;
Knyaz, Christina ;
Tamura, Koichiro .
MOLECULAR BIOLOGY AND EVOLUTION, 2018, 35 (06) :1547-1549
[7]   OrganellarGenomeDRAW-a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets [J].
Lohse, Marc ;
Drechsel, Oliver ;
Kahlau, Sabine ;
Bock, Ralph .
NUCLEIC ACIDS RESEARCH, 2013, 41 (W1) :W575-W581
[8]  
Meng G, 2019, NUCLEIC ACIDS RES
[9]   NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data [J].
Patel, Ravi K. ;
Jain, Mukesh .
PLOS ONE, 2012, 7 (02)
[10]   Enhanced cuticular penetration as the mechanism for synergy of insecticidal constituents of rosemary essential oil in Trichoplusia ni [J].
Tak, Jun-Hyung ;
Isman, Murray B. .
SCIENTIFIC REPORTS, 2015, 5