Vernalization - a cold-induced epigenetic switch

被引:176
作者
Song, Jie [1 ]
Angel, Andrew [1 ]
Howard, Martin [1 ]
Dean, Caroline [1 ]
机构
[1] John Innes Inst, Norwich NR4 7UH, Norfolk, England
基金
英国生物技术与生命科学研究理事会; 欧洲研究理事会;
关键词
Chromatin; Epigenetics; Flowering Locus C; Histone modification; Mathematical modelling; Polycomb; Vernalization; FLOWERING-LOCUS-C; POLYCOMB TARGET GENES; MADS BOX GENE; ARABIDOPSIS-THALIANA; HISTONE METHYLATION; NATURAL VARIATION; GROUP PROTEINS; MOLECULAR-BASIS; TIME-VARIATION; IN-VIVO;
D O I
10.1242/jcs.084764
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Growth and development are modulated by environmental signals in many organisms. These signals are often perceived at one stage and 'remembered' until later in development. An increasingly well-understood example of this process in plants is provided by vernalization, which refers to the acquisition of the ability to flower after prolonged exposure to cold. In Arabidopsis thaliana, vernalization involves downregulation and epigenetic silencing of the gene encoding the floral repressor FLOWERING LOCUS C (FLC). This epigenetic silencing is quantitative and increases with the duration of exposure to cold. Vernalization involves a Polycomb-based switching mechanism, with localized nucleation of silencing during periods of cold, and spreading of the silencing complex over the whole gene after the exposure to cold. A number of characteristics of vernalization have recently been elaborated on through the use of mathematical modelling. This has revealed the importance of chromatin dynamics for the switching mechanism and has shown that the quantitative nature of the process is due to cell-autonomous switching of an increasing proportion of cells. The principles derived from vernalization are likely to be widely relevant to epigenetic reprogramming in many organisms.
引用
收藏
页码:3723 / 3731
页数:9
相关论文
共 89 条
[1]   Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment [J].
Aikawa, Shinichiro ;
Kobayashi, Masaki J. ;
Satake, Akiko ;
Shimizu, Kentaro K. ;
Kudoh, Hiroshi .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (25) :11632-11637
[2]   COMPARATIVE ANALYSIS OF FLOWERING IN ANNUAL AND PERENNIAL PLANTS [J].
Albani, Maria C. ;
Coupland, George .
PLANT DEVELOPMENT, 2010, 91 :323-348
[3]   A Polycomb-based switch underlying quantitative epigenetic memory [J].
Angel, Andrew ;
Song, Jie ;
Dean, Caroline ;
Howard, Martin .
NATURE, 2011, 476 (7358) :105-+
[4]   Split decision: What happens to nucleosomes during DNA replication? [J].
Annunziato, AT .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (13) :12065-12068
[5]   A role for the CPF 3′-end processing machinery in RNAP II-dependent gene looping [J].
Ansari, A ;
Hampsey, M .
GENES & DEVELOPMENT, 2005, 19 (24) :2969-2978
[6]   Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions [J].
Bracken, AP ;
Dietrich, N ;
Pasini, D ;
Hansen, KH ;
Helin, K .
GENES & DEVELOPMENT, 2006, 20 (09) :1123-1136
[7]   DNA METHYLATION, VERNALIZATION, AND THE INITIATION OF FLOWERING [J].
BURN, JE ;
BAGNALL, DJ ;
METZGER, JD ;
DENNIS, ES ;
PEACOCK, WJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (01) :287-291
[8]   Interaction of polycomb-group proteins controlling flowering in Arabidopsis [J].
Chanvivattana, Y ;
Bishopp, A ;
Schubert, D ;
Stock, C ;
Moon, YH ;
Sung, ZR ;
Goodrich, J .
DEVELOPMENT, 2004, 131 (21) :5263-5276
[9]   Phytochrome signaling mechanisms and the control of plant development [J].
Chen, Meng ;
Chory, Joanne .
TRENDS IN CELL BIOLOGY, 2011, 21 (11) :664-671
[10]   Resetting and regulation of FLOWERING LOCUS C expression during Arabidopsis reproductive development [J].
Choi, Jean ;
Hyun, Youbong ;
Kang, Min-Jeong ;
In Yun, Hye ;
Yun, Jae-Young ;
Lister, Clare ;
Dean, Caroline ;
Amasino, Richard M. ;
Noh, Bosl ;
Noh, Yoo-Sun ;
Choi, Yeonhee .
PLANT JOURNAL, 2009, 57 (05) :918-931