mRNA quality control pathways in Saccharomyces cerevisiae

被引:11
作者
Das, Satarupa [1 ]
Das, Biswadip [1 ]
机构
[1] Jadavpur Univ, Dept Life Sci & Biotechnol, Kolkata 700032, W Bengal, India
关键词
Cbc1p; DRN; exosome; mRNA decay; mRNA surveillance; NMD; quality control; Rrp6p; NUCLEAR-PORE COMPLEX; NONSENSE-MEDIATED DECAY; CAP-BINDING PROTEIN; EXOSOME SUBUNIT RRP6P; C-TERMINAL DOMAIN; SKI COMPLEX; IN-VIVO; NUCLEOCYTOPLASMIC TRANSPORT; TRANSCRIPTION TERMINATION; BIDIRECTIONAL PROMOTERS;
D O I
10.1007/s12038-013-9337-4
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Efficient production of translation-competent mRNAs involves processing and modification events both in the nucleus and cytoplasm which require a number of complex machineries at both co-transcriptional and post-transcriptional levels. Mutations in the genomic sequence sometimes result in the formation of mutant nonfunctional defective messages. In addition, the enormous amounts of complexities involved in the biogenesis of mRNPs in the nucleus very often leads to the formation of aberrant and faulty messages along with their functional counterpart. Subsequent translation of these mutant and defective populations of messenger RNAs could possibly result in the unfaithful transmission of genetic information and thus is considered a threat to the survival of the cell. To prevent this possibility, mRNA quality control systems have evolved both in the nucleus and cytoplasm in eukaryotes to scrutinize various stages of mRNP biogenesis and translation. In this review, we will focus on the physiological role of some of these mRNA quality control systems in the simplest model eukaryote Saccharomyces cerevisiae.
引用
收藏
页码:615 / 640
页数:26
相关论文
共 50 条
[21]   A Nuclear Zip Code in SKS1 mRNA Promotes Its Slow Export, Nuclear Retention, and Degradation by the Nuclear Exosome/DRN in Saccharomyces cerevisiae [J].
Das, Subhadeep ;
Biswas, Subir ;
Chaudhuri, Shouvik ;
Bhattacharyya, Arindam ;
Das, Biswadip .
JOURNAL OF MOLECULAR BIOLOGY, 2019, 431 (19) :3626-3646
[22]   Cbc2p, Upf3p and eIF4G are components of the DRN (Degradation of mRNA in the Nucleus) in Saccharomyces cerevisiae [J].
Das, Satarupa ;
Saha, Upasana ;
Das, Biswadip .
FEMS YEAST RESEARCH, 2014, 14 (06) :922-932
[23]   Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function [J].
Isken, Olaf ;
Maquat, Lynne E. .
GENES & DEVELOPMENT, 2007, 21 (15) :1833-1856
[24]   Structure of the Saccharomyces cerevisiae Cet1-Ceg1 mRNA Capping Apparatus [J].
Gu, Meigang ;
Rajashankar, Kanagalaghatta R. ;
Lima, Christopher D. .
STRUCTURE, 2010, 18 (02) :216-227
[25]   Seeking a Role for Translational Control by Alternative Polyadenylation in Saccharomyces cerevisiae [J].
Turner, Rachael E. ;
Beilharz, Traude H. .
MICROORGANISMS, 2021, 9 (09)
[26]   DRN and TRAMP degrade specific and overlapping aberrant mRNAs formed at various stages of mRNP biogenesis in Saccharomyces cerevisiae [J].
Maity, Arpita ;
Chaudhuri, Anusha ;
Das, Biswadip .
FEMS YEAST RESEARCH, 2016, 16 (07)
[27]   Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae [J].
Tudek, Agnieszka ;
Krawczyk, Pawel S. ;
Mroczek, Seweryn ;
Tomecki, Rafal ;
Turtola, Matti ;
Matylla-Kulinska, Katarzyna ;
Jensen, Torben Heick ;
Dziembowski, Andrzej .
NATURE COMMUNICATIONS, 2021, 12 (01)
[28]   mRNA Editing, Processing and Quality Control inCaenorhabditis elegans [J].
Arribere, Joshua A. ;
Kuroyanagi, Hidehito ;
Hundley, Heather A. .
GENETICS, 2020, 215 (03) :531-568
[29]   A Convergence of rRNA and mRNA Quality Control Pathways Revealed by Mechanistic Analysis of Nonfunctional rRNA Decay [J].
Cole, Sarah E. ;
LaRiviere, Frederick J. ;
Merrikh, Christopher N. ;
Moore, Melissa J. .
MOLECULAR CELL, 2009, 34 (04) :440-450
[30]   Nrd1p identifies aberrant and natural exosomal target messages during the nuclear mRNA surveillance in Saccharomyces cerevisiae [J].
Singh, Pragyan ;
Chaudhuri, Anusha ;
Banerjea, Mayukh ;
Marathe, Neeraja ;
Das, Biswadip .
NUCLEIC ACIDS RESEARCH, 2021, 49 (20) :11512-11536