Relevance of Electrostatic Charges in Compactness, Aggregation, and Phase Separation of Intrinsically Disordered Proteins

被引:61
|
作者
Bianchi, Greta [1 ]
Longhi, Sonia [2 ,3 ]
Grandori, Rita [1 ]
Brocca, Stefania [1 ]
机构
[1] Univ Milano Bicocca, Dept Biotechnol & Biosci, I-20126 Milan, Italy
[2] Aix Marseille Univ, Lab Architecture & Fonct Macromol Biol AFMB, F-13288 Marseille, France
[3] CNRS, UMR 7257, F-13288 Marseille, France
关键词
charge density; fraction of net charge; net charge per residue; charge decoration; linear pattern of charge distribution; charge segregation; polyampholyte; polyelectrolyte; DE-NOVO DESIGN; ALPHA-SYNUCLEIN; COMPLEX COACERVATION; NET CHARGE; CONFORMATIONAL ENSEMBLES; SEQUENCE DETERMINANTS; UNSTRUCTURED PROTEINS; STRUCTURAL DISORDER; MEMBRANE-BINDING; IONIZABLE GROUPS;
D O I
10.3390/ijms21176208
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The abundance of intrinsic disorder in the protein realm and its role in a variety of physiological and pathological cellular events have strengthened the interest of the scientific community in understanding the structural and dynamical properties of intrinsically disordered proteins (IDPs) and regions (IDRs). Attempts at rationalizing the general principles underlying both conformational properties and transitions of IDPs/IDRs must consider the abundance of charged residues (Asp, Glu, Lys, and Arg) that typifies these proteins, rendering them assimilable to polyampholytes or polyelectrolytes. Their conformation strongly depends on both the charge density and distribution along the sequence (i.e., charge decoration) as highlighted by recent experimental and theoretical studies that have introduced novel descriptors. Published experimental data are revisited herein in the frame of this formalism, in a new and possibly unitary perspective. The physicochemical properties most directly affected by charge density and distribution are compaction and solubility, which can be described in a relatively simplified way by tools of polymer physics. Dissecting factors controlling such properties could contribute to better understanding complex biological phenomena, such as fibrillation and phase separation. Furthermore, this knowledge is expected to have enormous practical implications for the design, synthesis, and exploitation of bio-derived materials and the control of natural biological processes.
引用
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页码:1 / 30
页数:31
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