Evaluation of a Dried Blood and Plasma Collection Device, SampleTanker®, for HIV Type 1 Drug Resistance Genotyping in Patients Receiving Antiretroviral Therapy

被引:6
作者
Diallo, Karidia [1 ]
Lehotzky, Erica [1 ]
Zhang, Jing [1 ]
Zhou, Zhiyong [1 ]
de Rivera, Ivette Lorenzana [2 ]
Murillo, Wendy E. [2 ]
Nkengasong, John [1 ]
Sabatier, Jennifer [3 ]
Zhang, Guoqing [1 ]
Yang, Chunfu [1 ]
机构
[1] Ctr Dis Control & Prevent, Int Lab Branch, Div Global HIV AIDS, CGH, Atlanta, GA 30333 USA
[2] UNAH, Tegucigalpa, Honduras
[3] Ctr Dis Control & Prevent, Strateg Informat & Epidemiol Branch, Div Global HIV AIDS, CGH, Atlanta, GA 30333 USA
关键词
HUMAN-IMMUNODEFICIENCY-VIRUS; SPOT SPECIMENS; FILTER PAPERS; RNA; EXTRACTION; DIAGNOSIS; ASSAY; LOAD;
D O I
10.1089/aid.2013.0127
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Whatman 903 filter paper is the only filter paper that has been used for HIV drug resistance (HIVDR) genotyping in resource-limited settings. In this study, we evaluated another dried blood specimen collection device, termed SampleTanker((R)) (ST), for HIVDR genotyping. Blood specimens from 123 antiretroviral therapy (ART)-experienced patients were used to prepare ST whole blood and ST plasma specimens; they were then stored at ambient temperature for 2 or 4 weeks. The remaining plasma specimens were stored at -80 degrees C and used as frozen plasma controls. Frozen plasma viral load (VL) was determined using the Roche Amplicor HIV-1 Monitor test, v.1.5 and 50 specimens with VL 3.00 log(10) copies/ml were genotyped using the broadly sensitive genotyping assay. The medium VL for the 50 frozen plasma specimens with VL 3.00 log(10) was 3.58 log(10) copies/ml (IQR: 3.32-4.11) and 96.0% (48/50) of them were genotyped. Comparing to frozen plasma specimens, significantly lower genotyping rates were obtained from ST whole blood (48.98% and 42.85%) and ST plasma specimens (36.0% and 36.0%) stored at ambient temperature for 2 and 4 weeks, respectively (p<0.001). Nucleotide sequence identity and resistance profile analyses between the matched frozen plasma and ST whole blood or ST plasma specimens revealed high nucleotide sequence identities and concordant resistance profiles (98.1% and 99.0%, and 96.6% and 98.9%, respectively). Our results indicate that with the current design, the ST may not be the ideal dried blood specimen collection device for HIVDR monitoring for ART patients in resource-limited settings.
引用
收藏
页码:67 / 73
页数:7
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