UVSSA, UBP12, and RDO2/TFIIS Contribute to Arabidopsis UV Tolerance

被引:23
作者
Al Khateeb, Wesam M. [1 ]
Sher, Annan A. [2 ]
Marcus, Jeffery M. [2 ]
Schroeder, Dana F. [2 ]
机构
[1] Yarmouk Univ, Dept Biol Sci, Irbid, Jordan
[2] Univ Manitoba, Dept Biol Sci, Winnipeg, MB, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
Arabidopsis; transcription coupled repair; UV; CSA; CSB; UVSSA; UBP7; TFIIS; COCKAYNE-SYNDROME-A; COUPLED DNA-REPAIR; GENE-EXPRESSION; EXCISION-REPAIR; TRANSCRIPT CLEAVAGE; PROTEIN; GENOME; TFIIS; COMPONENTS; INTEGRITY;
D O I
10.3389/fpls.2019.00516
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Plant DNA is damaged by exposure to solar radiation, which includes ultraviolet (UV) rays. UV damaged DNA is repaired either by photolyases, using visible light energy, or by nucleotide excision repair (NER), also known as dark repair. NER consists of two subpathways: global genomic repair (GGR), which repairs untranscribed DNA throughout the genome, and transcription-coupled repair (TCR), which repairs transcribed DNA. In mammals, CSA, CSB, UVSSA, USP7, and TFIIS have been implicated in TCR. Arabidopsis homologs of CSA (AtCSA-1/2) and CSB (CHR8) have previously been shown to contribute to UV tolerance. Here we examine the role of Arabidopsis homologs of UVSSA, USP7 (UBP12/13), and TFIIS (RDO2) in UV tolerance. We find that loss of function alleles of UVSSA, UBP12, and RDO2 exhibit increased UV sensitivity in both seedlings and adults. UV sensitivity in atcsa-1, uvssa, and ubp12 mutants is specific to dark conditions, consistent with a role in NER. Interestingly, chr8 mutants exhibit UV sensitivity in both light and dark conditions, suggesting that the Arabidopsis CSB homolog may play a role in both NER and light repair. Overall our results indicate a conserved role for UVSSA, USP7 (UBP12), and TFIIS (RDO2) in TCR.
引用
收藏
页数:9
相关论文
共 59 条
[1]   Genome-wide Insertional mutagenesis of Arabidopsis thaliana [J].
Alonso, JM ;
Stepanova, AN ;
Leisse, TJ ;
Kim, CJ ;
Chen, HM ;
Shinn, P ;
Stevenson, DK ;
Zimmerman, J ;
Barajas, P ;
Cheuk, R ;
Gadrinab, C ;
Heller, C ;
Jeske, A ;
Koesema, E ;
Meyers, CC ;
Parker, H ;
Prednis, L ;
Ansari, Y ;
Choy, N ;
Deen, H ;
Geralt, M ;
Hazari, N ;
Hom, E ;
Karnes, M ;
Mulholland, C ;
Ndubaku, R ;
Schmidt, I ;
Guzman, P ;
Aguilar-Henonin, L ;
Schmid, M ;
Weigel, D ;
Carter, DE ;
Marchand, T ;
Risseeuw, E ;
Brogden, D ;
Zeko, A ;
Crosby, WL ;
Berry, CC ;
Ecker, JR .
SCIENCE, 2003, 301 (5633) :653-657
[2]   Regulation of the stability of RGF1 receptor by the ubiquitin-specific proteases UBP12/UBP13 is critical for root meristem maintenance [J].
An, Zhichao ;
Liu, Yuliang ;
Ou, Yang ;
Li, Jia ;
Zhang, Baowen ;
Sun, Daye ;
Sun, Yu ;
Tang, Wenqiang .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (05) :1123-1128
[3]   The Composition of the Arabidopsis RNA Polymerase II Transcript Elongation Complex Reveals the Interplay between Elongation and mRNA Processing Factors [J].
Antosz, Wojciech ;
Pfab, Alexander ;
Ehrnsberger, Hans F. ;
Holzinger, Philipp ;
Koellen, Karin ;
Mortensen, Simon A. ;
Bruckmann, Astrid ;
Schubert, Thomas ;
Laengst, Gernot ;
Griesenbeck, Joachim ;
Schubert, Veit ;
Grasser, Marion ;
Grasser, Klaus D. .
PLANT CELL, 2017, 29 (04) :854-870
[4]   A C. elegans homolog for the UV-hypersensitivity syndrome disease gene UVSSA [J].
Babu, Vipin ;
Schumacher, Bjoern .
DNA REPAIR, 2016, 41 :8-15
[5]   The DDB1a interacting proteins ATCSA-1 and DDB2 are critical factors for UV-B tolerance and genomic integrity in Arabidopsis thaliana [J].
Biedermann, Sascha ;
Hellmann, Hanjo .
PLANT JOURNAL, 2010, 62 (03) :404-415
[6]   Mechanistic insights into the regulation of transcription and transcription-coupled DNA repair by Cockayne syndrome protein B [J].
Boetefuer, Erica L. ;
Lake, Robert J. ;
Fan, Hua-Ying .
NUCLEIC ACIDS RESEARCH, 2018, 46 (15) :7471-7479
[7]   JBrowse: a dynamic web platform for genome visualization and analysis [J].
Buels, Robert ;
Yao, Eric ;
Diesh, Colin M. ;
Hayes, Richard D. ;
Munoz-Torres, Monica ;
Helt, Gregg ;
Goodstein, David M. ;
Elsik, Christine G. ;
Lewis, Suzanna E. ;
Stein, Lincoln ;
Holmes, Ian H. .
GENOME BIOLOGY, 2016, 17
[8]   Photosensitivity syndrome brings to light a new transcription-coupled DNA repair cofactor [J].
Cleaver, James E. .
NATURE GENETICS, 2012, 44 (05) :477-478
[9]   Ubiquitin-Specific Proteases UBP12 and UBP13 Act in Circadian Clock and Photoperiodic Flowering Regulation in Arabidopsis [J].
Cui, Xia ;
Lu, Falong ;
Li, Yue ;
Xue, Yongming ;
Kang, Yanyuan ;
Zhang, Shuaibin ;
Qiu, Qi ;
Cui, Xiekui ;
Zheng, Shuzhi ;
Liu, Bin ;
Xu, Xiaodong ;
Cao, Xiaofeng .
PLANT PHYSIOLOGY, 2013, 162 (02) :897-906
[10]   ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins [J].
de Castro, Edouard ;
Sigrist, Christian J. A. ;
Gattiker, Alexandre ;
Bulliard, Virginie ;
Langendijk-Genevaux, Petra S. ;
Gasteiger, Elisabeth ;
Bairoch, Amos ;
Hulo, Nicolas .
NUCLEIC ACIDS RESEARCH, 2006, 34 :W362-W365