Dynamics and stability of a three-dimensional model of cell signal transduction with delay

被引:4
作者
Levy, Chris [1 ]
Iron, David [1 ]
机构
[1] Dalhousie Univ, Dept Phys, Halifax, NS B3H 3J5, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
signal transduction; perturbation methods; delay differential equations; numerical simulations; localized structures; PHOSPHORYLATION; ULTRASENSITIVITY; GRADIENTS; CASCADES; TIME;
D O I
10.1088/0951-7715/28/7/2515
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
In this paper, we consider a three-dimensional model of cell signal transduction with delay. The deactivation of signalling proteins occurs throughout the cytosol and activation is localized to specific sites in the cell. The enzyme kinetic functions employ a constant delay to model the time lapse during reactions and also the recovery times associated with conformational changes. We use matched asymptotic expansions to construct the dynamic solutions of signalling protein concentrations. The result of the asymptotic analysis is a system of delayed differential algebraic equations. This reduced system is compared to numerical simulations of the full three-dimensional system. As well, we consider the stability of equilibrium solutions. We find that the systems under consideration may undergo Hopf bifurcations for certain delay values. In these cases sustained oscillations are observed. The Poincare-Lindstedt3 method is used to improve upon the asymptotic approximations. The simulations of the full three-dimensional system correspond well with simulations of the reduced delayed differential algebraic equations.
引用
收藏
页码:2515 / 2553
页数:39
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