Rational engineering of Geobacter sulfurreducens electron transfer components: a foundation for building improved Geobacter-based bioelectrochemical technologies

被引:33
作者
Dantas, Joana M. [1 ]
Morgado, Leonor [1 ]
Aklujkar, Muktak [2 ]
Bruix, Marta [3 ]
Londer, Yuri Y. [4 ]
Schiffer, Marianne [4 ]
Pokkuluri, P. Raj [4 ]
Salgueiro, Carlos A. [1 ]
机构
[1] Univ Nova Lisboa, Fac Ciencias & Tecnol, Res Unit Appl Mol Biosci UCIBIO, Rede Quim & Tecnol,Dept Quim, P-2829516 Caparica, Portugal
[2] Towson Univ, Dept Biol Sci, Towson, MD USA
[3] CSIC, Inst Quim Fis Rocasolano, Dept Quim Fis Biol, Madrid, Spain
[4] Argonne Natl Lab, Biosci Div, Lemont, IL USA
关键词
Geobacter; cytochrome c; multiheme; extracellular electron transfer; Geobacter mutant strains; TRIHEME CYTOCHROME PPCA; C-TYPE CYTOCHROMES; LINKED CONFORMATIONAL-CHANGES; AROMATIC RESIDUE F-15; THERMODYNAMIC CHARACTERIZATION; HETEROLOGOUS EXPRESSION; REDUCING MICROORGANISM; MULTIDOMAIN CYTOCHROME; MAGNETIC-PROPERTIES; FE(III) REDUCTION;
D O I
10.3389/fmicb.2015.00752
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Multiheme cytochromes have been implicated in Geobacter sulfurreducens extracellular electron transfer (EET). These proteins are potential targets to improve EET and enhance bioremediation and electrical current production by G. sulfurreducens. However, the functional characterization of multiheme cytochromes is particularly complex due to the co-existence of several microstates in solution, connecting the fully reduced and fully oxidized states. Over the last decade, new strategies have been developed to characterize multiheme redox proteins functionally and structurally. These strategies were used to reveal the functional mechanism of G. sulfurreducens multiheme cytochromes and also to identify key residues in these proteins for EET. In previous studies, we set the foundations for enhancement of the EET abilities of G. sulfurreducens by characterizing a family of five triheme cytochromes (PpcA-E). These periplasmic cytochromes are implicated in electron transfer between the oxidative reactions of metabolism in the cytoplasm and the reduction of extracellular terminal electron acceptors at the cell's outer surface. The results obtained suggested that PpcA can couple e(-)/H+ transfer, a property that might contribute to the proton electrochemical gradient across the cytoplasmic membrane for metabolic energy production. The structural and functional properties of PpcA were characterized in detail and used for rational design of a family of 23 single site PpcA mutants. In this review, we summarize the functional characterization of the native and mutant proteins. Mutants that retain the mechanistic features of PpcA and adopt preferential e(-)/H+ transfer pathways at lower reduction potential values compared to the wild-type protein were selected for in vivo studies as the best candidates to increase the electron transfer rate of G. sulfurreducens. For the first time G. sulfurreducens strains have been manipulated by the introduction of mutant forms of essential proteins with the aim to develop and improve bioelectrochemical technologies.
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页数:15
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共 55 条
[41]   Anode Biofilm Transcriptomics Reveals Outer Surface Components Essential for High Density Current Production in Geobacter sulfurreducens Fuel Cells [J].
Nevin, Kelly P. ;
Kim, Byoung-Chan ;
Glaven, Richard H. ;
Johnson, Jessica P. ;
Woodard, Trevor L. ;
Methe, Barbara A. ;
DiDonato, Raymond J., Jr. ;
Covalla, Sean F. ;
Franks, Ashley E. ;
Liu, Anna ;
Lovley, Derek R. .
PLOS ONE, 2009, 4 (05)
[42]   Redox Linked Conformational Changes in Cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774 [J].
Paixao, Vitor B. ;
Vis, Hans ;
Turner, David L. .
BIOCHEMISTRY, 2010, 49 (44) :9620-9629
[43]   Redox characterization of Geobacter sulfurreducens cytochrome c7:: Physiological relevance of the conserved residue F15 probed by site-specific mutagenesis [J].
Pessanha, M ;
Londer, YY ;
Long, WC ;
Erickson, J ;
Pokkuluri, PR ;
Schiffer, M ;
Salgueiro, CA .
BIOCHEMISTRY, 2004, 43 (30) :9909-9917
[44]   Thermodynamic characterization of triheme cytochrome PpcA from Geobacter sulfurreducens:: Evidence for a role played in e-/H+ energy transduction [J].
Pessanha, Miguel ;
Morgado, Leonor ;
Louro, Ricardo O. ;
Londer, Yuri Y. ;
Pokkuluri, P. Raj ;
Schiffer, Marianne ;
Salgueiro, Carlos A. .
BIOCHEMISTRY, 2006, 45 (46) :13910-13917
[45]   Structural characterization of a family of cytochromes c7 involved in Fe(III) respiration by Geobacter sulfurreducens [J].
Pokkuluri, P. R. ;
Londer, Y. Y. ;
Yang, X. ;
Duke, N. E. C. ;
Erickson, J. ;
Orshonsky, V. ;
Johnson, G. ;
Schiffer, M. .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2010, 1797 (02) :222-232
[46]   Family of cytochrome c7-type proteins from Geobacter sulfurreducens:: Structure of one cytochrome c7 at 1.45 Å resolution [J].
Pokkuluri, PR ;
Londer, YY ;
Duke, NEC ;
Long, WC ;
Schiffer, M .
BIOCHEMISTRY, 2004, 43 (04) :849-859
[47]   Structure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer [J].
Pokkuluri, PR ;
Londer, YY ;
Duke, NEC ;
Erickson, J ;
Pessanha, M ;
Salgueiro, CA ;
Schiffer, M .
PROTEIN SCIENCE, 2004, 13 (06) :1684-1692
[48]   Outer membrane cytochrome c, OmcF, from Geobacter sulfurreducens: High structural similarity to an algal cytochrome c6 [J].
Pokkuluri, R. R. ;
Londer, Y. Y. ;
Wood, S. J. ;
Duke, N. E. C. ;
Morgado, L. ;
SaIgueiro, C. A. ;
Schiffer, M. .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2009, 74 (01) :266-270
[49]   Importance of c-type cytochromes for U(VI) reduction by Geobacter sulfurreducens [J].
Shelobolina, Evgenya S. ;
Coppi, Maddalena V. ;
Korenevsky, Anton A. ;
DiDonato, Laurie N. ;
Sullivan, Sara A. ;
Konishi, Hiromi ;
Xu, Huifang ;
Leang, Ching ;
Butler, Jessica E. ;
Kim, Byoung-Chan ;
Lovley, Derek R. .
BMC MICROBIOLOGY, 2007, 7 (1)
[50]   Overexpression of multi-heme C-type cytochromes [J].
Shi, L ;
Lin, JT ;
Markillie, LM ;
Squier, TC ;
Hooker, BS .
BIOTECHNIQUES, 2005, 38 (02) :297-299