Microbial Bebop: Creating Music from Complex Dynamics in Microbial Ecology

被引:15
作者
Larsen, Peter [1 ]
Gilbert, Jack [1 ,2 ]
机构
[1] Argonne Natl Lab, Biosci Div, Argonne, IL 60439 USA
[2] Univ Chicago, Dept Ecol & Evolut, Chicago, IL 60637 USA
来源
PLOS ONE | 2013年 / 8卷 / 03期
基金
美国能源部;
关键词
D O I
10.1371/journal.pone.0058119
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In order for society to make effective policy decisions on complex and far-reaching subjects, such as appropriate responses to global climate change, scientists must effectively communicate complex results to the non-scientifically specialized public. However, there are few ways however to transform highly complicated scientific data into formats that are engaging to the general community. Taking inspiration from patterns observed in nature and from some of the principles of jazz bebop improvisation, we have generated Microbial Bebop, a method by which microbial environmental data are transformed into music. Microbial Bebop uses meter, pitch, duration, and harmony to highlight the relationships between multiple data types in complex biological datasets. We use a comprehensive microbial ecology, time course dataset collected at the L4 marine monitoring station in the Western English Channel as an example of microbial ecological data that can be transformed into music. Four compositions were generated (www.bio.anl.gov/MicrobialBebop.htm.) from L4 Station data using Microbial Bebop. Each composition, though deriving from the same dataset, is created to highlight different relationships between environmental conditions and microbial community structure. The approach presented here can be applied to a wide variety of complex biological datasets.
引用
收藏
页数:4
相关论文
共 10 条
[1]  
[Anonymous], NATURE STRUCTURAL MO
[2]  
[Anonymous], 2012, Science and Engineering Indicators 2012
[3]   The perception of musical spontaneity in improvised and imitated jazz performances [J].
Engel, Annerose ;
Keller, Peter E. .
FRONTIERS IN PSYCHOLOGY, 2011, 2
[4]  
Gilbert J.A., 2011, The ISME Journal, P1
[5]  
Keller B, 2011, IMPROVISOR V4 12
[6]   Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site [J].
Morris, RM ;
Vergin, KL ;
Cho, JC ;
Rappé, MS ;
Carlson, CA ;
Giovannoni, SJ .
LIMNOLOGY AND OCEANOGRAPHY, 2005, 50 (05) :1687-1696
[7]  
OHNO S, 1986, CHEM SCRIPTA, V26B, P43
[8]  
Szwed John., 2000, JAZZ 101 COMPLETE GU
[9]   Conversion of amino-acid sequence in proteins to classical music: search for auditory patterns [J].
Takahashi, Rie ;
Miller, Jeffrey H. .
GENOME BIOLOGY, 2007, 8 (05)
[10]   Seasonality and vertical structure of microbial communities in an ocean gyre [J].
Treusch, Alexander H. ;
Vergin, Kevin L. ;
Finlay, Liam A. ;
Donatz, Michael G. ;
Burton, Robert M. ;
Carlson, Craig A. ;
Giovannoni, Stephen J. .
ISME JOURNAL, 2009, 3 (10) :1148-1163