2D autocorrelation modeling of the negative inotropic activity of calcium entry blockers using Bayesian-regularized genetic neural networks

被引:37
作者
Caballero, J
Garriga, M
Fernández, M
机构
[1] Univ Matanzas, Fac Agron, Mol Modeling Grp, Ctr Biotechnol Studies, Matanzas 44740, Cuba
[2] Univ Matanzas, Fac Agron, Plant Biotechnol Grp, Ctr Biotechnol Studies, Matanzas 44740, Cuba
关键词
Bayesian regularization; QSAR; myocardial activity; artificial neural networks; genetic algorithm;
D O I
10.1016/j.bmc.2005.12.048
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Negative inotropic potency of 60 benzothiazepine-like calcium entry blockers (CEBs), Diltiazem analogs, was successfully modeled using Bayesian-regularized genetic neural networks (BRGNNs) and 2D autocorrelation vectors. This approach yielded reliable and robust models whilst by means of a linear genetic algorithm (GA) search routine no multilinear regression model was found describing more than 50% of the training set. On the contrary, the optimum neural network predictor with five inputs described about 84%, and 65% variances of 50 randomly selected training and test sets. Autocorrelation vectors in the nonlinear model contained information regarding 2D spatial distributions on the CEB structure of van der Waals volumes, electronegativities, and polarizabilities. However, a sensitivity analysis of the network inputs pointed out to the electronegativity and polarizability 2D topological distributions at substructural fragments of sizes 3 and 4 as the most relevant features governing the nonlinear modeling of the negative inotropic potency. (c) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码:3330 / 3340
页数:11
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