GenomePixelizer - a visualization program for comparative genomics within and between species

被引：47

作者：

Kozik, A ^{[1
]}

Kochetkova, E ^{[1
]}

Michelmore, R ^{[1
]}

机构：

[1] Univ Calif Davis, Dept Vegetable Crops, Davis, CA 95616 USA

来源：

BIOINFORMATICS | 2002年 / 18卷 / 02期

基金：

美国国家科学基金会;

关键词：

D O I：

10.1093/bioinformatics/18.2.335

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

GenomePixelizer is a visualization tool that generates custom images of the physical or genetic positions of specified sets of genes in whole genomes or parts of genomes. Multiple sets of genes can be shown simultaneously with user-defined characteristics displayed. It allows the analysis of duplication events within and between species based on sequence similarities. The program is written in Tcl/Tk and works on any platform that supports the Tcl/Tk toolkit. GenomePixelizer generates HTML ImageMap tags for each gene in the image allowing links to databases. Images can be saved and presented on web pages.

引用

页码：335 / 336

页数：2