A Comparison of Methods of Data Mining Algorithms Directed Predictive Pharmacosafety Networks for Adverse Drug Event Detection
被引:0
作者:
Ji, Xiangmin
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Ordos Inst Technol, Dept Informat Engn, Ordos, Inner Mongolia, Peoples R ChinaHarbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Ji, Xiangmin
[1
,2
]
Hua, Liyan
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R ChinaHarbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Hua, Liyan
[1
]
Wang, Xueying
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R ChinaHarbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Wang, Xueying
[1
]
Zhang, Yunfei
论文数: 0引用数: 0
h-index: 0
机构:
Ordos Inst Technol, Dept Informat Engn, Ordos, Inner Mongolia, Peoples R ChinaHarbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Zhang, Yunfei
[2
]
Li, Jin
论文数: 0引用数: 0
h-index: 0
机构:
Harbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R ChinaHarbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
Li, Jin
[1
]
机构:
[1] Harbin Engn Univ, Coll Automat, Harbin, Heilongjiang, Peoples R China
[2] Ordos Inst Technol, Dept Informat Engn, Ordos, Inner Mongolia, Peoples R China
来源:
2019 IEEE INTERNATIONAL CONFERENCE ON MECHATRONICS AND AUTOMATION (ICMA)
|
2019年
基金:
中国国家自然科学基金;
关键词:
Adverse drug event;
Data Mining Algorithm;
Disproportionality Analysis;
Predictive Pharmacosafety Networks;
Pharmacovigilance;
SIGNAL-DETECTION;
D O I:
10.1109/icma.2019.8816543
中图分类号:
TP [自动化技术、计算机技术];
学科分类号:
0812 ;
摘要:
Adverse drug events (ADEs) detection is the critical concern in the field of pharmacovigilance, and it is also necessary to optimize the ADEs prediction to reduce the drugrelated morbidity and mortality. Here we propose a novel methods of data mining algorithms directed predictive pharmacosafety networks (PPNs) to compare their predictive performance and investigate the differences between data mining algorithms. The combinations of 152 cancer drugs and 633 ADEs in the 2010 FDA Adverse Event Reporting System(FAERS) data is the training data, and 2011-2015 FAERS data is the validation data. We find that performance of empirical Bayes geometric mean (EBGM) is closer to proportional reporting ratio (PRR), and greater than reporting odds ratio (ROR) in ADE detection. Further, only information component (IC) directed the PPNs have better predictive performance comparing to other data mining algorithms, the predictive performance of which reaches to AUROC=0.908 comparing to the existing AUROC=0.823, and the performance of IC is greater than EBGM in ADE detection.
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Cheng, Feixiong
Li, Weihua
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Li, Weihua
Wang, Xichuan
论文数: 0引用数: 0
h-index: 0
机构:
Shanghai MCC Hosp, Dept Surg, Shanghai 200941, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Wang, Xichuan
Zhou, Yadi
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Zhou, Yadi
Wu, Zengrui
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Wu, Zengrui
Shen, Jie
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Shen, Jie
Tang, Yun
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Cheng, Feixiong
Li, Weihua
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Li, Weihua
Wu, Zengrui
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Wu, Zengrui
Wang, Xichuan
论文数: 0引用数: 0
h-index: 0
机构:
Shanghai MCC Hosp, Dept Surg, Shanghai 200941, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Wang, Xichuan
Zhang, Chen
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Zhang, Chen
Li, Jie
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Li, Jie
Liu, Guixia
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Liu, Guixia
Tang, Yun
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
机构:
Inst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, SpainInst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
Duran-Frigola, Miquel
Aloy, Patrick
论文数: 0引用数: 0
h-index: 0
机构:
Inst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
ICREA, Barcelona 08010, SpainInst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Harpaz, R.
DuMouchel, W.
论文数: 0引用数: 0
h-index: 0
机构:
Oracle Hlth Sci, Burlington, MA USA
Observat Med Outcomes Partnership, Bethesda, MD USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
DuMouchel, W.
LePendu, P.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
LePendu, P.
Bauer-Mehren, A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Bauer-Mehren, A.
Ryan, P.
论文数: 0引用数: 0
h-index: 0
机构:
Observat Med Outcomes Partnership, Bethesda, MD USA
Janssen Res & Dev, Raritan, NJ USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Ryan, P.
Shah, N. H.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Cheng, Feixiong
Li, Weihua
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Li, Weihua
Wang, Xichuan
论文数: 0引用数: 0
h-index: 0
机构:
Shanghai MCC Hosp, Dept Surg, Shanghai 200941, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Wang, Xichuan
Zhou, Yadi
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Zhou, Yadi
Wu, Zengrui
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Wu, Zengrui
Shen, Jie
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
Shen, Jie
Tang, Yun
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Sch Pharm, Shanghai Key Lab New Drug Design, Shanghai 200237, Peoples R China
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Cheng, Feixiong
Li, Weihua
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Li, Weihua
Wu, Zengrui
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Wu, Zengrui
Wang, Xichuan
论文数: 0引用数: 0
h-index: 0
机构:
Shanghai MCC Hosp, Dept Surg, Shanghai 200941, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Wang, Xichuan
Zhang, Chen
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Zhang, Chen
Li, Jie
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Li, Jie
Liu, Guixia
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
Liu, Guixia
Tang, Yun
论文数: 0引用数: 0
h-index: 0
机构:
E China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R ChinaE China Univ Sci & Technol, Shanghai Key Lab New Drug Design, Sch Pharm, Shanghai 200237, Peoples R China
机构:
Inst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, SpainInst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
Duran-Frigola, Miquel
Aloy, Patrick
论文数: 0引用数: 0
h-index: 0
机构:
Inst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
ICREA, Barcelona 08010, SpainInst Res Biomed IRB Barcelona, Joint IRB BSC Program Computat Biol, Barcelona 08028, Spain
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Harpaz, R.
DuMouchel, W.
论文数: 0引用数: 0
h-index: 0
机构:
Oracle Hlth Sci, Burlington, MA USA
Observat Med Outcomes Partnership, Bethesda, MD USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
DuMouchel, W.
LePendu, P.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
LePendu, P.
Bauer-Mehren, A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Bauer-Mehren, A.
Ryan, P.
论文数: 0引用数: 0
h-index: 0
机构:
Observat Med Outcomes Partnership, Bethesda, MD USA
Janssen Res & Dev, Raritan, NJ USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA
Ryan, P.
Shah, N. H.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USAStanford Univ, Stanford Ctr Biomed Informat Res, Stanford, CA 94305 USA