Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients

被引:50
作者
Chen, Shujun [1 ,2 ,3 ]
Shu, Zhenyu [4 ]
Li, Yongfeng [1 ,2 ,5 ]
Chen, Bo [1 ,2 ,6 ]
Tang, Lirong [1 ,2 ,3 ]
Mo, Wenju [1 ,2 ,5 ]
Shao, Guoliang [1 ,2 ,3 ]
Shao, Feng [1 ,2 ,7 ]
机构
[1] Univ Chinese Acad Sci, Canc Hosp, Zhejiang Canc Hosp, Hangzhou, Peoples R China
[2] Chinese Acad Sci, Inst Canc & Basic Med IBMC, Hangzhou, Peoples R China
[3] Zhejiang Canc Hosp, Dept Radiol, Hangzhou, Peoples R China
[4] Zhejiang Prov Peoples Hosp, Affiliated Peoples Hosp, Dept Radiol, Hangzhou Med Coll, Hangzhou, Peoples R China
[5] Zhejiang Canc Hosp, Dept Breast Surg, Hangzhou, Peoples R China
[6] Zhejiang Canc Hosp, Dept Pathol, Hangzhou, Peoples R China
[7] Zhejiang Canc Hosp, Dept Gynecol Oncol, Hangzhou, Peoples R China
关键词
radiomics; nomogram; breast cancer; neoadjuvant chemotherapy; pathological complete response; machine learning; PATHOLOGICAL RESPONSE; TEXTURE ANALYSIS; RECTAL-CANCER; MRI; PET/CT; FEATURES; MODELS;
D O I
10.3389/fonc.2020.01410
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose:The construction and validation of a radiomics nomogram based on machine learning using magnetic resonance image (MRI) for predicting the efficacy of neoadjuvant chemotherapy (NACT) in patients with breast cancer (BCa). Methods:This retrospective investigation consisted of 158 patients who were diagnosed with BCa and underwent MRI before NACT, of which 33 patients experienced pathological complete response (pCR) by the postoperative pathological examination. The patients with BCa were divided into the training set (n= 110) and test set (n= 48) randomly. The features were selected by the maximum relevance minimum redundancy (mRMR) and absolute shrinkage and selection operator (LASSO) algorithm in the training set. In return, the radiomics signature was established using machine learning. The predictive score of each patient was calculated using the radiomics signature formula. Finally, the predictive scores and clinical factors were used to perform the multivariate logistic regression and construct the nomogram. Receiver operating characteristics (ROC) analyses were used to assess and validate the diagnostic accuracy of the nomogram in the test set. Lastly, the usefulness of the nomogram was confirmed via decision curve analysis (DCA). Results:The radiomics signature was well-discriminated in the training set [AUC 0.835, specificity 71.32%, and sensitivity 82.61%], and test set (AUC 0.834, specificity 73.21%, and sensitivity 80%). Containing the radiomics signature and hormone status, the radiomics nomogram showed good calibration and discrimination in the training set [AUC 0.888, specificity 79.31%, and sensitivity 86.96%] and test set (AUC 0.879, specificity 82.19%, and sensitivity 83.57%). The decision curve indicated the clinical usefulness of our nomogram. Conclusion:Our radiomics nomogram showed good discrimination in patients with BCa who experience pCR after NACT. The model may aid physicians in predicting how specific patients may respond to BCa treatments in the future.
引用
收藏
页数:14
相关论文
共 41 条
[1]   Long-term outcomes for neoadjuvant versus adjuvant chemotherapy in early breast cancer: meta-analysis of individual patient data from ten randomised trials [J].
Alberro, J. A. ;
Ballester, B. ;
Deulofeu, P. ;
Fabregas, R. ;
Fraile, M. ;
Gubern, J. M. ;
Janer, J. ;
Moral, A. ;
de Pablo, J. L. ;
Penalva, G. ;
Puig, P. ;
Ramos, M. ;
Rojo, R. ;
Santesteban, P. ;
Serra, C. ;
Sola, M. ;
Solarnau, L. ;
Solsona, J. ;
Veloso, E. ;
Vidal, S. ;
Abe, O. ;
Abe, R. ;
Enomoto, K. ;
Kikuchi, K. ;
Koyama, H. ;
Masuda, H. ;
Nomura, Y. ;
Ohashi, Y. ;
Sakai, K. ;
Sugimachi, K. ;
Toi, M. ;
Tominaga, T. ;
Uchino, J. ;
Yoshida, M. ;
Coles, C. E. ;
Haybittle, J. L. ;
Moebus, V. ;
Leonard, C. F. ;
Calais, G. ;
Garaud, P. ;
Collett, V. ;
Davies, C. ;
Delmestri, A. ;
Sayer, J. ;
Harvey, V. J. ;
Holdaway, I. M. ;
Kay, R. G. ;
Mason, B. H. ;
Forbe, J. F. ;
Franci, P. A. .
LANCET ONCOLOGY, 2018, 19 (01) :27-39
[2]   mRMR-ABC: A Hybrid Gene Selection Algorithm for Cancer Classification Using Microarray Gene Expression Profiling [J].
Alshamlan, Hala ;
Badr, Ghada ;
Alohali, Yousef .
BIOMED RESEARCH INTERNATIONAL, 2015, 2015
[3]   Neoadjuvant endocrine therapy in breast cancer: current role and future perspectives [J].
Barroso-Sousa, Romualdo ;
Fonseca Reis Silva, Danilo D. A. ;
Machado Alessi, Joao Victor ;
Mano, Max Senna .
ECANCERMEDICALSCIENCE, 2016, 10
[4]   Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI [J].
Braman, Nathaniel M. ;
Etesami, Maryam ;
Prasanna, Prateek ;
Dubchuk, Christina ;
Gilmore, Hannah ;
Tiwari, Pallavi ;
Pletcha, Donna ;
Madabhushi, Anant .
BREAST CANCER RESEARCH, 2017, 19
[5]   Features from Computerized Texture Analysis of Breast Cancers at Pretreatment MR Imaging Are Associated with Response to Neoadjuvant Chemotherapy [J].
Chamming's, Foucauld ;
Ueno, Yoshiko ;
Ferre, Romuald ;
Kao, Ellen ;
Jannot, Anne-Sophie ;
Chong, Jaron ;
Omeroglu, Atilla ;
Mesurolle, Benoit ;
Reinhold, Caroline ;
Gallix, Benoit .
RADIOLOGY, 2018, 286 (02) :412-420
[6]   Machine Learning for Drug-Target Interaction Prediction [J].
Chen, Ruolan ;
Liu, Xiangrong ;
Jin, Shuting ;
Lin, Jiawei ;
Liu, Juan .
MOLECULES, 2018, 23 (09)
[7]  
Chen VE, 2017, ADV RADIAT ONCOL, V2, P105, DOI 10.1016/j.adro.2017.01.012
[8]   Are Complex DCE-MRI Models Supported by Clinical Data? [J].
Duan, Chong ;
Kallehauge, Jesper F. ;
Bretthorst, G. Larry ;
Tanderup, Kari ;
Ackerman, Joseph J. H. ;
Garbow, Joel R. .
MAGNETIC RESONANCE IN MEDICINE, 2017, 77 (03) :1329-1339
[9]   Dermatologist-level classification of skin cancer with deep neural networks [J].
Esteva, Andre ;
Kuprel, Brett ;
Novoa, Roberto A. ;
Ko, Justin ;
Swetter, Susan M. ;
Blau, Helen M. ;
Thrun, Sebastian .
NATURE, 2017, 542 (7639) :115-+
[10]   Radiomics: Images Are More than Pictures, They Are Data [J].
Gillies, Robert J. ;
Kinahan, Paul E. ;
Hricak, Hedvig .
RADIOLOGY, 2016, 278 (02) :563-577