De novo transcriptome assembly and analysis of differential gene expression following peptidoglycan (PGN) challenge in Antheraea pernyi

被引:9
作者
Liu, Yu [1 ,2 ]
Xin, Zhao-Zhe [1 ,2 ]
Zhang, Dai-Zhen [1 ]
Zhu, Xiao-Yu [1 ]
Wang, Ying [1 ]
Chen, Li [3 ]
Tang, Bo-Ping [1 ]
Zhou, Chun-Lin [1 ]
Chai, Xin-Yue [1 ]
Tian, Ji-Wu [4 ]
Liu, Qiu-Ning [1 ]
机构
[1] Yancheng Teachers Univ, Jiangsu Synthet Innovat Ctr Coastal Bioagr, Jiangsu Key Lab Bioresources Saline Soils,Sch Oce, Jiangsu Prov Key Lab Coastal Wetland Bioresources, Yancheng 224007, Jiangsu, Peoples R China
[2] Nanjing Univ Technol, Coll Biotechnol & Pharmaceut Engn, Nanjing 210009, Jiangsu, Peoples R China
[3] Henan Inst Sericultural Sci, Zhengzhou 450002, Henan, Peoples R China
[4] Agr Dept Henan Prov, Zhengzhou 450002, Henan, Peoples R China
基金
中国国家自然科学基金;
关键词
Transcriptome; Antheraea pernyi; Peptidoglycan; CHINESE OAK SILKWORM; HEAT-SHOCK PROTEINS; RNA-SEQ; RECOGNITION PROTEINS; IMMUNE-RESPONSES; SERINE-PROTEASE; TOOL; IDENTIFICATION; GALLERIMYCIN; ANNOTATION;
D O I
10.1016/j.ijbiomac.2018.02.085
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Antheraea pernyi is not only an important economic insect, it is increasingly employed as a model organism due to a variety of advantages, including ease of rearing and experimental manipulation compared with other Lepidoptera. Peptidoglycan (PGN) is a major component of the bacterial cell wall, and interactions between PGN and A. pernyi cause a series of physiological changes in the insect. In the present study, we constructed cDNA libraries from a A. pernyi PGN-infected group and a control group stimulated with phosphate-buffered saline (PBS). The transcriptome was de novo assembled using the Trinity platform, and 1698 differentially expressed genes (DEGs) were identified, comprising 894 up-regulated and 804 down-regulated genes. To further investigate immune-related DEGs, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment were performed. GO analysis identified major immune-related GO terms and KEGG enrichment indicated gene responses to three pathways related to the insect immune system. Several homologous genes related to the immune response of the A. pernyi fat body post-PGN infection were identified and categorised. Taken together, the results provide insight into the complex molecular mechanisms of the responses to bacterial infection at the transcriptional level. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:1199 / 1207
页数:9
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