Monogenic causes of chronic kidney disease in adults

被引:189
作者
Connaughton, Deryla M. [1 ,2 ,3 ]
Kennedy, Claire [2 ]
Shrill, Shirlee [1 ]
Mann, Nina [1 ]
Murray, Susan L. [2 ]
Williams, Patrick A. [2 ,4 ]
Conlon, Eoin [2 ,4 ]
Nakayama, Makiko [1 ]
van der Ven, Amelie T. [1 ]
Ityel, Hadas [1 ]
Kause, Franziska [1 ]
Kolvenbach, Caroline M. [1 ]
Dai, Rufeng [1 ]
Vivante, Asaf [1 ,5 ]
Braun, Daniela A. [1 ]
Schneider, Ronen [1 ]
Kitzler, Thomas M. [1 ]
Moloney, Brona [2 ]
Moran, Conor P. [6 ]
Smyth, John S. [6 ]
Kennedy, Alan [3 ]
Benson, Katherine [4 ]
Stapleton, Caragh [4 ]
Denton, Mark [2 ]
Magee, Coim [2 ]
O'Seaghdha, Conall M. [2 ]
Plant, William D. [7 ,8 ]
Griffin, Matthew D. [9 ,10 ]
Awan, Atif [11 ,12 ]
Sweeney, Clodagh [11 ,12 ]
Mane, Shrikant M. [13 ]
Lifton, Richard P. [13 ,14 ]
Griffin, Brenda [3 ]
Leavey, Sean [15 ]
Casserly, Liam [16 ,17 ]
de Freitas, Declan G. [2 ]
Holian, John [18 ]
Dorman, Anthony [4 ,19 ]
Doyle, Brendan [19 ]
Lavin, Peter J. [20 ]
Little, Mark A. [3 ]
Conlon, Peter J. [2 ,4 ]
Hildebrandt, Friedhelm [1 ]
机构
[1] Harvard Med Sch, Boston Childrens Hosp, Dept Med, Boston, MA 02115 USA
[2] Beaumont Hosp, Dept Nephrol & Transplantat, Dublin 9, Ireland
[3] Trinity Coll Dublin, Trinity Hlth Kidney Ctr, Trinity Translat Med Inst, Dublin, Ireland
[4] Royal Coll Surgeons Ireland, Dublin, Ireland
[5] Tel Aviv Univ, Sackler Fac Med, Tel Aviv, Israel
[6] Belfast Ulster Hosp, Dept Nephrol, Belfast, Antrim, North Ireland
[7] Cork Univ Hosp, Dept Renal Med, Cork, Ireland
[8] Univ Coll Cork, Cork, Ireland
[9] Galway Univ Hosp, Dept Nephrol, Galway, Ireland
[10] Natl Univ Ireland, Sch Med, Galway, Ireland
[11] Temple St Childrens Univ Hosp, Natl Paediat Haemodialysis Ctr, Dublin, Ireland
[12] Temple St Childrens Univ Hosp, Renal Transplant Unit, Dublin, Ireland
[13] Yale Univ, Sch Med, Dept Genet, New Haven, CT 06510 USA
[14] Rockefeller Univ, 1230 York Ave, New York, NY 10021 USA
[15] Univ Hosp Waterford, Dept Nephrol, Waterford, Ireland
[16] Univ Hosp Limerick, Dept Nephrol, Limerick, Ireland
[17] Univ Hosp Limerick, Dept Internal Med, Limerick, Ireland
[18] St Vincents Univ Hosp, Dept Nephrol, Dublin, Ireland
[19] Beaumont Hosp, Dept Histopathol, Dublin, Ireland
[20] Tallaght Univ Hosp, Trinity Coll Dublin, Trinity Hlth Kidney Ctr, Dublin, Ireland
基金
美国国家卫生研究院; 爱尔兰科学基金会; 加拿大健康研究院;
关键词
chronic kidney disease; genetic kidney disease; whole exome sequencing; CONGENITAL-ANOMALIES; MUTATIONS; VARIANTS; ESRD;
D O I
10.1016/j.kint.2018.10.031
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Approximately 500 monogenic causes of chronic kidney disease (CKD) have been identified, mainly in pediatric populations. The frequency of monogenic causes among adults with CKD has been less extensively studied. To determine the likelihood of detecting monogenic causes of CKD in adults presenting to nephrology services in Ireland, we conducted whole exome sequencing (WES) in a multicentre cohort of 114 families including 138 affected individuals with CKD. Affected adults were recruited from 78 families with a positive family history, 16 families with extra-renal features, and 20 families with neither a family history nor extra-renal features. We detected a pathogenic mutation in a known CKD gene in 42 of 114 families (37%). A monogenic cause was identified in 36% of affected families with a positive family history of CKD, 69% of those with extra-renal features, and only 15% of those without a family history or extra-renal features. There was no difference in the rate of genetic diagnosis in individuals with childhood versus adult onset CKD. Among the 42 families in whom a monogenic cause was identified, WES confirmed the clinical diagnosis in 17 (40%), corrected the clinical diagnosis in 9 (22%), and established a diagnosis for the first time in 16 families referred with CKD of unknown etiology (38%). In this multi-centre study of adults with CKD, a molecular genetic diagnosis was established in over one-third of families. In the evolving era of precision medicine, WES may be an important tool to identify the cause of CKD in adults.
引用
收藏
页码:914 / 928
页数:15
相关论文
共 30 条
[1]   Clinical and molecular characterization defines a broadened spectrum of autosomal recessive polycystic kidney disease (ARPKD) [J].
Adeva, M ;
El-Youssef, M ;
Rossetti, SO ;
Kamath, PS ;
Kubly, V ;
Consugar, MB ;
Milliner, DM ;
King, BF ;
Torres, VE ;
Harris, PC .
MEDICINE, 2006, 85 (01) :1-21
[2]  
Barker DF, 2001, AM J MED GENET, V98, P148, DOI 10.1002/1096-8628(20010115)98:2<148::AID-AJMG1024>3.0.CO
[3]  
2-W
[4]   Clinical consequences of PKHD1 mutations in 164 patients with autosomal-recessive polycystic kidney disease (ARPKD) [J].
Bergmann, C ;
Senderek, J ;
Windelen, E ;
Küpper, F ;
Middeldorf, I ;
Schneider, F ;
Dornia, C ;
Rudnik-Schöneborn, S ;
Konrad, M ;
Schmitt, CP ;
Seeman, T ;
Neuhaus, TJ ;
Vester, U ;
Kirfel, J ;
Büttner, R ;
Zerres, K .
KIDNEY INTERNATIONAL, 2005, 67 (03) :829-848
[5]   The Irish Kidney Gene Project - Prevalence of Family History in Patients with Kidney Disease in Ireland [J].
Connaughton, Dervla M. ;
Bukhari, Sarah ;
Conlon, Peter ;
Cassidy, Eoin ;
O'Toole, Michael ;
Mohamad, Mardina ;
Flanagan, John ;
Butler, Triona ;
O'Leary, Anne ;
Wong, Limy ;
O'Regan, John ;
Moran, Sarah ;
O'Kelly, Patrick ;
Logan, Valerie ;
Griffin, Brenda ;
Griffin, Matthew ;
Lavin, Peter ;
Little, Mark A. ;
Conlon, Peter .
NEPHRON, 2015, 130 (04) :293-301
[6]   Mutations in complement C3 predispose to development of atypical hemolytic uremic syndrome [J].
Fremeaux-Bacchi, Veronique ;
Miller, Elizabeth C. ;
Liszewski, M. Kathryn ;
Strain, Lisa ;
Blouin, Jacques ;
Brown, Alison L. ;
Moghal, Nadeem ;
Kaplan, Bernard S. ;
Weiss, Robert A. ;
Lhotta, Karl ;
Kapur, Gaurav ;
Mattoo, Tej ;
Nivet, Hubert ;
Wong, William ;
Gie, Sophie ;
de Ligny, Bruno Hurault ;
Fischbach, Michel ;
Gupta, Ritu ;
Hauhart, Richard ;
Meunier, Vincent ;
Loirat, Chantal ;
Dragon-Durey, Marie-Agnes ;
Fridman, Wolf H. ;
Janssen, Bert J. C. ;
Goodship, Timothy H. J. ;
Atkinson, John P. .
BLOOD, 2008, 112 (13) :4948-4952
[7]   Chronic kidney disease and cardiovascular risk: epidemiology, mechanisms, and prevention [J].
Gansevoort, Ron T. ;
Correa-Rotter, Ricardo ;
Hemmelgarn, Brenda R. ;
Jafar, Tazeen H. ;
Heerspink, Hiddo J. Lambers ;
Mann, Johannes F. ;
Matsushita, Kunihiro ;
Wen, Chi Pang .
LANCET, 2013, 382 (9889) :339-352
[8]   Whole-exome resequencing distinguishes cystic kidney diseases from phenocopies in renal ciliopathies [J].
Gee, Heon Yung ;
Otto, Edgar A. ;
Hurd, Toby W. ;
Ashraf, Shazia ;
Chaki, Moumita ;
Cluckey, Andrew ;
Vega-Warner, Virginia ;
Saisawat, Pawaree ;
Diaz, Katrina A. ;
Fang, Humphrey ;
Kohl, Stefan ;
Allen, Susan J. ;
Airik, Rannar ;
Zhou, Weibin ;
Ramaswami, Gokul ;
Janssen, Sabine ;
Fu, Clementine ;
Innis, Jamie L. ;
Weber, Stefanie ;
Vester, Udo ;
Davis, Erica E. ;
Katsanis, Nicholas ;
Fathy, Hanan M. ;
Jeck, Nikola ;
Klaus, Gunther ;
Nayir, Ahmet ;
Rahim, Khawla A. ;
Al Attrach, Ibrahim ;
Al Hassoun, Ibrahim ;
Ozturk, Savas ;
Drozdz, Dorota ;
Helmchen, Udo ;
O'Toole, John F. ;
Attanasio, Massimo ;
Lewis, Richard A. ;
Nuernberg, Gudrun ;
Nuernberg, Peter ;
Washburn, Joseph ;
MacDonald, James ;
Innis, Jeffrey W. ;
Levy, Shawn ;
Hildebrandt, Friedhelm .
KIDNEY INTERNATIONAL, 2014, 85 (04) :880-887
[9]  
Go AS, 2009, NEW ENGL J MED, V351, P1296
[10]   Living donor kidney transplantation from relatives with mild urinary abnormalities in Alport syndrome: long-term risk, benefit and outcome [J].
Gross, Oliver ;
Weber, Manfred ;
Fries, Jochen W. U. ;
Mueller, Gerhard-Anton .
NEPHROLOGY DIALYSIS TRANSPLANTATION, 2009, 24 (05) :1626-1630