Coarse-grained hybrid simulation of liposomes

被引:23
作者
Sevink, G. J. A. [1 ]
Charlaganov, M. [1 ]
Fraaije, J. G. E. M. [1 ]
机构
[1] Leiden Univ, Leiden Inst Chem, NL-2300 RA Leiden, Netherlands
关键词
VESICLE FORMATION; COPOLYMER MELTS; LIPID-BILAYERS; DYNAMICS; MEMBRANES; 3D;
D O I
10.1039/c2sm27492b
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We developed a new hybrid model for efficient modeling of complete vesicles with molecular detail. Combining elements of Brownian dynamics (BD) and dynamic density functional theory (DDFT), we reduce the computational load of an existing coarse grained particle- based dissipative particle dynamics (DPD) model by representing the solvent as a continuum variable or a field, in a consistent manner. Both particle and field representations are spatially unrestricted and there is no need to treat boundaries explicitly. We focus on developing a general framework for deriving the parameters in this hybrid approach from existing DPD representations, and validate this new method via a comparison to DPD results. In addition, we consider a few proof of principle calculations for large systems, including a vesicle of realistic dimensions (similar to 45 nm radius) containing o (10(4)) lipids simulated for o (10(6)) time steps, to illustrate the performance of the new method.
引用
收藏
页码:2816 / 2831
页数:16
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