机构:
Natl Inst Informat, Chiyoda Ku, Tokyo 1018430, Japan
Japan Sci & Technol Corp, PRESTO, Chiyoda Ku, Tokyo 1018430, JapanNatl Inst Informat, Chiyoda Ku, Tokyo 1018430, Japan
Collier, Nigel
[1
,2
]
机构:
[1] Natl Inst Informat, Chiyoda Ku, Tokyo 1018430, Japan
[2] Japan Sci & Technol Corp, PRESTO, Chiyoda Ku, Tokyo 1018430, Japan
来源:
JOURNAL OF BIOMEDICAL SEMANTICS
|
2010年
/
1卷
基金:
日本科学技术振兴机构;
关键词:
DETECTION ALGORITHMS;
HEALTH;
SYSTEM;
D O I:
10.1186/2041-1480-1-2
中图分类号:
Q [生物科学];
学科分类号:
07 ;
0710 ;
09 ;
摘要:
Background: Accurate and timely detection of public health events of international concern is necessary to help support risk assessment and response and save lives. Novel event-based methods that use the World Wide Web as a signal source offer potential to extend health surveillance into areas where traditional indicator networks are lacking. In this paper we address the issue of systematically evaluating online health news to support automatic alerting using daily disease-country counts text mined from real world data using BioCaster. For 18 data sets produced by BioCaster, we compare 5 aberration detection algorithms (EARS C2, C3, W2, F-statistic and EWMA) for performance against expert moderated ProMED-mail postings. Results: We report sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), mean alerts/100 days and F1, at 95% confidence interval (CI) for 287 ProMED-mail postings on 18 outbreaks across 14 countries over a 366 day period. Results indicate that W2 had the best F1 with a slight benefit for day of week effect over C2. In drill down analysis we indicate issues arising from the granular choice of country-level modeling, sudden drops in reporting due to day of week effects and reporting bias. Automatic alerting has been implemented in BioCaster available from http://born.nii.ac.jp. Conclusions: Online health news alerts have the potential to enhance manual analytical methods by increasing throughput, timeliness and detection rates. Systematic evaluation of health news aberrations is necessary to push forward our understanding of the complex relationship between news report volumes and case numbers and to select the best performing features and algorithms.
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Japan Sci & Technol Corp, PRESTO, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Collier, Nigel
Doan, Son
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Doan, Son
Kawazoe, Ai
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Kawazoe, Ai
Goodwin, Reiko Matsuda
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, Japan
CUNY Herbert H Lehman Coll, Dept Anthropol, Bronx, NY 10468 USAROIS, Natl Inst Informat, Tokyo 1018430, Japan
Goodwin, Reiko Matsuda
Conway, Mike
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Conway, Mike
Tateno, Yoshio
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Genet, Mishima, Shizuoka 4118540, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Tateno, Yoshio
Quoc-Hung Ngo
论文数: 0引用数: 0
h-index: 0
机构:ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Quoc-Hung Ngo
Dinh Dien
论文数: 0引用数: 0
h-index: 0
机构:ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Dinh Dien
Kawtrakul, Asanee
论文数: 0引用数: 0
h-index: 0
机构:
Kasetsart Univ, Dept Comp Engn, NECTEC, Bangkok, ThailandROIS, Natl Inst Informat, Tokyo 1018430, Japan
Kawtrakul, Asanee
Takeuchi, Koichi
论文数: 0引用数: 0
h-index: 0
机构:
Okayama Univ, Okayama 7008530, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Takeuchi, Koichi
Shigematsu, Mika
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Infect Dis, Tokyo 1628640, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Shigematsu, Mika
Taniguchi, Kiyosu
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Infect Dis, Tokyo 1628640, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
机构:
Toronto Gen Hosp, Dept Hlth Policy Management & Evaluat, Toronto, ON M5G 2C4, Canada
Toronto Gen Hosp, Ctr Global eHlth Innovat, Toronto, ON M5G 2C4, CanadaToronto Gen Hosp, Dept Hlth Policy Management & Evaluat, Toronto, ON M5G 2C4, Canada
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Freifeld, Clark C.
Mandl, Kenneth D.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Mandl, Kenneth D.
Ras, Ben Y.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Ras, Ben Y.
Bronwnstein, John S.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Japan Sci & Technol Corp, PRESTO, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Collier, Nigel
Doan, Son
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Doan, Son
Kawazoe, Ai
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Kawazoe, Ai
Goodwin, Reiko Matsuda
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, Japan
CUNY Herbert H Lehman Coll, Dept Anthropol, Bronx, NY 10468 USAROIS, Natl Inst Informat, Tokyo 1018430, Japan
Goodwin, Reiko Matsuda
Conway, Mike
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Informat, Tokyo 1018430, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Conway, Mike
Tateno, Yoshio
论文数: 0引用数: 0
h-index: 0
机构:
ROIS, Natl Inst Genet, Mishima, Shizuoka 4118540, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Tateno, Yoshio
Quoc-Hung Ngo
论文数: 0引用数: 0
h-index: 0
机构:ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Quoc-Hung Ngo
Dinh Dien
论文数: 0引用数: 0
h-index: 0
机构:ROIS, Natl Inst Informat, Tokyo 1018430, Japan
Dinh Dien
Kawtrakul, Asanee
论文数: 0引用数: 0
h-index: 0
机构:
Kasetsart Univ, Dept Comp Engn, NECTEC, Bangkok, ThailandROIS, Natl Inst Informat, Tokyo 1018430, Japan
Kawtrakul, Asanee
Takeuchi, Koichi
论文数: 0引用数: 0
h-index: 0
机构:
Okayama Univ, Okayama 7008530, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Takeuchi, Koichi
Shigematsu, Mika
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Infect Dis, Tokyo 1628640, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
Shigematsu, Mika
Taniguchi, Kiyosu
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Infect Dis, Tokyo 1628640, JapanROIS, Natl Inst Informat, Tokyo 1018430, Japan
机构:
Toronto Gen Hosp, Dept Hlth Policy Management & Evaluat, Toronto, ON M5G 2C4, Canada
Toronto Gen Hosp, Ctr Global eHlth Innovat, Toronto, ON M5G 2C4, CanadaToronto Gen Hosp, Dept Hlth Policy Management & Evaluat, Toronto, ON M5G 2C4, Canada
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Freifeld, Clark C.
Mandl, Kenneth D.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Mandl, Kenneth D.
Ras, Ben Y.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Ras, Ben Y.
Bronwnstein, John S.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA
Childrens Hosp, Div Emergency Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Pediat, Boston, MA 02115 USAHarvard MIT, Childrens Hosp, Div Hlth Sci, Informat Program, Boston, MA 02115 USA