Diffusion of complex objects embedded in free and supported lipid bilayer membranes: role of shape anisotropy and leaflet structure

被引:55
作者
Camley, Brian A. [1 ,2 ,3 ]
Brown, Frank L. H. [3 ,4 ]
机构
[1] Univ Calif San Diego, Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USA
[3] Univ Calif Santa Barbara, Dept Phys, Santa Barbara, CA 93106 USA
[4] Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
基金
美国国家科学基金会;
关键词
GIANT UNILAMELLAR VESICLES; BROWNIAN-MOTION; TRANSLATIONAL DIFFUSION; LATERAL DIFFUSION; MULTISUBUNIT STRUCTURES; ROTATIONAL DIFFUSION; SIZE DEPENDENCE; PROTEINS; DYNAMICS; COEFFICIENTS;
D O I
10.1039/c3sm00073g
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present a versatile numerical scheme to predict diffusion coefficients for arbitrarily shaped objects embedded in lipid bilayer membranes. Diffusion coefficients for micron-scale diamond-shaped solid domains are calculated for direct comparison to recent experiments. In supported membranes, identical objects in the distal and proximal leaflets may diffuse differently from one another; quantitative predictions for this asymmetry are provided, both for experimental systems and coarse-grained molecular simulations. We show that though recent experiments comparing the diffusion of monomeric, dimeric and trimeric protein assemblies moving over the surface of supported bilayers are inconsistent with the simplest Saffman-Delbruck model, they may be explained by a hydrodynamic model appropriate for supported membranes.
引用
收藏
页码:4767 / 4779
页数:13
相关论文
共 88 条
  • [1] On the diffusion of circular domains on a spherical vesicle
    Aliaskarisohi, S.
    Tierno, P.
    Dhar, P.
    Khattari, Z.
    Blaszczynski, M.
    Fischer, Th. M.
    [J]. JOURNAL OF FLUID MECHANICS, 2010, 654 : 417 - 451
  • [2] A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales
    Atzberger, Paul J.
    Kramer, Peter R.
    Peskin, Charles S.
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 2007, 224 (02) : 1255 - 1292
  • [3] Stochastic Eulerian Lagrangian methods for fluid-structure interactions with thermal fluctuations
    Atzberger, Paul J.
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 2011, 230 (08) : 2821 - 2837
  • [4] PHYSICS OF CHEMORECEPTION
    BERG, HC
    PURCELL, EM
    [J]. BIOPHYSICAL JOURNAL, 1977, 20 (02) : 193 - 219
  • [5] Dynamical membrane curvature instability controlled by intermonolayer friction
    Bitbol, Anne-Florence
    Fournier, Jean-Baptiste
    Angelova, Miglena I.
    Puff, Nicolas
    [J]. JOURNAL OF PHYSICS-CONDENSED MATTER, 2011, 23 (28)
  • [6] INTRACELLULAR PROTEIN TOPOGENESIS
    BLOBEL, G
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1980, 77 (03): : 1496 - 1500
  • [7] FRICTIONAL COEFFICIENTS OF MULTISUBUNIT STRUCTURES .1. THEORY
    BLOOMFIE.V
    DALTON, WO
    VANHOLDE, KE
    [J]. BIOPOLYMERS, 1967, 5 (02) : 135 - &
  • [8] Continuum simulations of biomembrane dynamics and the importance of hydrodynamic effects
    Brown, Frank L. H.
    [J]. QUARTERLY REVIEWS OF BIOPHYSICS, 2011, 44 (04) : 391 - 432
  • [9] EFFECT OF HYDRODYNAMIC INTERACTIONS ON THE DIFFUSION OF INTEGRAL MEMBRANE-PROTEINS - DIFFUSION IN PLASMA-MEMBRANES
    BUSSELL, SJ
    KOCH, DL
    HAMMER, DA
    [J]. BIOPHYSICAL JOURNAL, 1995, 68 (05) : 1836 - 1849
  • [10] Contributions to membrane-embedded-protein diffusion beyond hydrodynamic theories
    Camley, Brian A.
    Brown, Frank L. H.
    [J]. PHYSICAL REVIEW E, 2012, 85 (06):