The regulation of mRNA stability in mammalian cells: 2.0

被引:186
作者
Wu, Xiangyue [1 ]
Brewer, Gary [1 ]
机构
[1] Univ Med & Dent New Jersey, Robert Wood Johnson Med Sch, Dept Mol Genet Microbiol & Immunol, Piscataway, NJ 08854 USA
关键词
mRNA degradation pathways; RNA surveillance; AU-rich elements; RNA-binding proteins; Noncoding RNAs; EXON JUNCTION COMPLEX; ACTIVATED PROTEIN-KINASE; 3' UNTRANSLATED REGION; GU-RICH ELEMENTS; BINDING-PROTEIN; POSTTRANSCRIPTIONAL REGULATION; MEDIATED DECAY; TRANSLATIONAL REPRESSION; QUALITY-CONTROL; NUCLEAR IMPORT;
D O I
10.1016/j.gene.2012.03.021
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Messenger RNA decay is an essential step in gene expression to set mRNA abundance in the cytoplasm. The binding of proteins and/or noncoding RNAs to specific recognition sequences or secondary structures within mRNAs dictates mRNA decay rates by recruiting specific enzyme complexes that perform the destruction processes. Often, the cell coordinates the degradation or stabilization of functional subsets of mRNAs encoding proteins collectively required for a biological process. As well, extrinsic or intrinsic stimuli activate signal transduction pathways that modify the mRNA decay machinery with consequent effects on decay rates and mRNA abundance. This review is an update to our 2001 Gene review on mRNA stability in mammalian cells, and we survey the enormous progress made over the past decade. (c) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:10 / 21
页数:12
相关论文
共 166 条
[1]   Ubiquitin-mediated proteolysis of HuR by heat shock [J].
Abdelmohsen, Kotb ;
Srikantan, Subramanya ;
Yang, Xiaoling ;
Lal, Ashish ;
Kim, Hyeon Ho ;
Kuwano, Yuki ;
Galban, Stefanie ;
Becker, Kevin G. ;
Kamara, Davida ;
de Cabo, Rafael ;
Gorospe, Myriam .
EMBO JOURNAL, 2009, 28 (09) :1271-1282
[2]   A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay [J].
Amrani, N ;
Ganesan, R ;
Kervestin, S ;
Mangus, DA ;
Ghosh, S ;
Jacobson, A .
NATURE, 2004, 432 (7013) :112-118
[3]   Early nonsense: mRNA decay solves a translational problem [J].
Amrani, Nadia ;
Sachs, Matthew S. ;
Jacobson, Allan .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (06) :415-425
[4]   Sequence-specific RNA binding mediated by the RNase PH domain of components of the exosome [J].
Anderson, John R. ;
Mukherjee, Devi ;
Muthukumaraswamy, Karthika ;
Moraes, Karen C. M. ;
Wilusz, Carol J. ;
Wilusz, Jeffrey .
RNA, 2006, 12 (10) :1810-1816
[5]   RNA granules [J].
Anderson, P ;
Kedersha, N .
JOURNAL OF CELL BIOLOGY, 2006, 172 (06) :803-808
[6]   The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity [J].
Ballut, L ;
Marchadier, B ;
Baguet, A ;
Tomasetto, C ;
Séraphin, B ;
Le Hir, H .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2005, 12 (10) :861-869
[7]   AU-rich elements and associated factors: are there unifying principles? [J].
Barreau, C ;
Paillard, L ;
Osborne, HB .
NUCLEIC ACIDS RESEARCH, 2005, 33 (22) :7138-7150
[8]   MicroRNAs: Target Recognition and Regulatory Functions [J].
Bartel, David P. .
CELL, 2009, 136 (02) :215-233
[9]   MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004) [J].
Bartel, David P. .
CELL, 2007, 131 (04) :11-29
[10]   MicroRNAs silence gene expression by repressing protein expression and/or by promoting mRNA decay [J].
Behm-Ansmant, I. ;
Rehwinkel, J. ;
Izaurralde, E. .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2006, 71 :523-530