Quantitation of magnetic resonance spectroscopy signals: the jMRUI software package

被引:406
作者
Stefan, D. [1 ]
Di Cesare, F. [2 ]
Andrasescu, A. [1 ]
Popa, E. [2 ]
Lazariev, A. [2 ]
Vescovo, E. [3 ]
Strbak, O. [4 ]
Williams, S. [3 ]
Starcuk, Z. [4 ]
Cabanas, M. [5 ]
van Ormondt, D. [6 ]
Graveron-Demilly, D. [2 ]
机构
[1] Alter Syst, Lyon, France
[2] Univ Lyon 1, CNRS, INSERM, U630,UMR 5220,INSA Lyon,Lab CREATIS LRMN, F-69622 Villeurbanne, France
[3] Univ Manchester, Manchester, Lancs, England
[4] ASCR, Inst Sci Instruments, Dept Magnet Resonance & Bioinformat, Brno, Czech Republic
[5] Univ Autonoma Barcelona, Fac Ciencies, Serv Ressonancia Magnet Nucl, Cerdanyola Del Valles, Spain
[6] Delft Univ Technol, Delft, Netherlands
关键词
MR spectroscopy; MRS; MRSI; HRMAS-NMR; jMRUI software package; !text type='Java']Java[!/text; plug-ins; quantitation; GRAPHICAL USER-INTERFACE; MRS DATA; QUANTIFICATION; ALGORITHM; ACCURATE; BRAIN; MRUI;
D O I
10.1088/0957-0233/20/10/104035
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
The software package jMRUI with Java-based graphical user interface enables user-friendly time-domain analysis of magnetic resonance spectroscopy (MRS) and spectroscopic imaging (MRSI) and HRMAS-NMR signals. Version 3.x has been distributed in more than 1200 groups or hospitals worldwide. The new version 4.x is a plug-in platform enabling the users to add their own algorithms. Moreover, it offers new functionalities compared to versions 3.x. The quantum-mechanical simulator based on NMR-SCOPE, the quantitation algorithm QUEST and the main MRSI functionalities are described. Quantitation results of signals obtained in vivo from a mouse and a human brain are given.
引用
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页数:9
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