Halomonas tabrizica sp nov., a novel moderately halophilic bacterium isolated from Urmia Lake in Iran

被引:8
作者
Vahed, Sepideh Zununi [1 ,2 ]
Forouhandeh, Haleh [3 ]
Tarhriz, Vahideh [1 ,3 ]
Chaparzadeh, Nader [5 ]
Hejazi, Mohammad Amin [6 ]
Jeon, Che Ok [4 ]
Hejazi, Mohammad Saeid [1 ,3 ]
Lee, Yunho [4 ]
机构
[1] Tabriz Univ Med Sci, Dept Pharmaceut Biotechnol, Fac Pharm, Tabriz, Iran
[2] Tabriz Univ Med Sci, Kidney Res Ctr, Tabriz, Iran
[3] Tabriz Univ Med Sci, Biomed Inst, Mol Med Res Ctr, Tabriz, Iran
[4] Chung Ang Univ, Dept Life Sci, 84 HeukSeok Ro, Seoul 06974, South Korea
[5] Azarbaijan Shahid Madani Univ, Dept Biol, Tabriz, Iran
[6] AREEO, Dept Food Biotechnol, Branch Northwest & West Reg, Agr Biotechnol Res Inst Iran, Tabriz, Iran
来源
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY | 2018年 / 111卷 / 07期
基金
新加坡国家研究基金会;
关键词
Halomonas tabrizica; Polyphasic taxonomy; Novel species; Urmia Lake; GEN.-NOV; FAMILY HALOMONADACEAE; DEOXYRIBONUCLEIC-ACID; RAPID METHOD; COMB.-NOV; CLASSIFICATION; ZYMOBACTER; SIMILARITY; DATABASE; PROPOSAL;
D O I
10.1007/s10482-018-1018-8
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel moderately halophilic, Gram-stain negative and aerobic bacterium, designated strain TBZ21(T), was isolated from a water sample of Urmia Lake, Iran. Cells were observed to be non-motile rods with no flagellum, showing positive catalase and oxidase reactions. Strain TBZ21(T) was found to grow at 10-40 A degrees C (optimum, 30 A degrees C), at pH 7-10 (optimum, pH 8) and in the presence of 1-22% (optimum, 10%). The major fatty acids were identified as C-19:0 cyclo omega 8c, C-16:0, Summed features 3 (C-13:0 3-OH and/or iso-C-15:1 H) and 8 (C-18:1 omega 7c and/or C-18:1 omega 6c) and C-12:0 3-OH. The major polar lipids were identified as diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified phosphoaminolipid. The genomic DNA G+C content of strain TBZ21(T) was determined to be 63.3 mol%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain TBZ21(T) belongs to the genus Halomonas, and shows high sequence similarities to Halomonas fontilapidosi 5CR(T) (99.43%), Halomonas ventosae AL12(T) (98.64%), Halomonas sediminicola CPS11(T) (98.63%) and Halomonas aestuarii Hb3(T) (98.08%), and has low similarities (below 98.0%) with other members of the genus. The values of DNA-DNA relatedness between strain TBZ21(T) and the closely related strains H. fontilapidosi LMG 24455(T) and H. ventosae LMG 26187(T) were 42 +/- 11% and 54 +/- 16%, respectively. On the basis of phenotypic, chemotaxonomic and molecular characteristics, strain TBZ21(T) is concluded to represent a novel species of the genus Halomonas, for which the name Halomonas tabrizica sp. nov. is proposed. The type strain is TBZ21(T) (=LMG 25445(T)=DSM 23018(T)).
引用
收藏
页码:1139 / 1148
页数:10
相关论文
共 51 条
[1]   Salinicola socius gen. nov., sp nov., a moderately halophilic bacterium from a naphthalene-utilizing microbial association [J].
Anan'ina, L. N. ;
Plotnikova, E. G. ;
Gavrish, E. Yu. ;
Demakov, V. A. ;
Evtushenko, L. I. .
MICROBIOLOGY, 2007, 76 (03) :324-330
[2]  
[Anonymous], SALINE SYST
[3]   Recommended minimal standards for describing new taxa of the family Halomonadaceae [J].
Arahal, David R. ;
Vreeland, Russell H. ;
Litchfield, Carol D. ;
Mormile, Melanie R. ;
Tindall, Brian J. ;
Oren, Aharon ;
Bejar, Victoria ;
Quesada, Emilia ;
Ventosa, Antonio .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2436-2446
[4]   Proposal of Cobetia marina gen. nov., comb. nov., within the family Halomonadaceae, to include the species Halomonas marina [J].
Arahal, DR ;
Castillo, AM ;
Ludwig, W ;
Schleifer, KH ;
Ventosa, A .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2002, 25 (02) :207-211
[5]   Halomonas maura sp nov., a novel moderately halophilic, exopolysaccharide-producing bacterium [J].
Bouchotroch, S ;
Quesada, E ;
del Moral, A ;
Llamas, I ;
Béjar, V .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1625-1632
[6]   RAPID METHOD FOR BASE RATIO DETERMINATION OF BACTERIAL DNA [J].
CASHION, P ;
HOLDERFRANKLIN, MA ;
MCCULLY, J ;
FRANKLIN, M .
ANALYTICAL BIOCHEMISTRY, 1977, 81 (02) :461-466
[7]   Multilocus sequence analysis of the family Halomonadaceae [J].
de la Haba, Rafael R. ;
Carmen Marquez, M. ;
Papke, R. Thane ;
Ventosa, Antonio .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 :520-538
[8]   Unification of the genera Deleya (Baumann et al 1983), Halomonas (Vreeland et al 1980), and Halovibrio (Fendrich 1988) and the species Paracoccus halodenitrificans (Robinson and Gibbons 1952) into a single genus, Halomonas, and placement of the genus Zymobacter in the family Halomonadaceae [J].
Dobson, SJ ;
Franzmann, PD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (02) :550-558
[9]  
Eimanifar Amin, 2007, Saline Syst, V3, P5, DOI 10.1186/1746-1448-3-5
[10]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229