A Computational Approach with Biological Evaluation: Combinatorial Treatment of Curcumin and Exemestane Synergistically Regulates DDX3 Expression in Cancer Cell Lines

被引:16
作者
Rampogu, Shailima [1 ]
Kim, Seong Min [2 ,3 ]
Son, Minky [1 ]
Baek, Ayoung [1 ]
Park, Chanin [1 ]
Lee, Gihwan [1 ]
Kim, Yumi [1 ]
Kim, Gon Sup [2 ,3 ]
Kim, Ju Hyun [4 ]
Lee, Keun Woo [1 ]
机构
[1] Gyeongsang Natl Univ GNU, Res Inst Nat Sci RINS, Div Life Sci, Div Appl Life Sci,BK21 Plus,Plant Mol Biol & Biot, 501 Jinju Daero, Jinju 52828, South Korea
[2] Gyeongsang Natl Univ, Life Sci Res Inst, 501 Jinju Daero, Jinju 52828, South Korea
[3] Gyeongsang Natl Univ, Coll Vet Med, 501 Jinju Daero, Jinju 52828, South Korea
[4] Gyeongsang Natl Univ, Res Inst Nat Sci RINS, Dept Chem, BK 21 Plus, Jinju 52828, Gyeongnam, South Korea
基金
新加坡国家研究基金会;
关键词
DDX3; cancers; natural compounds; combinatorial treatment; SMALL-MOLECULE INHIBITOR; RNA HELICASE DDX3; BREAST-CANCER; THERAPEUTIC APPLICATIONS; BINDING DATABASE; TARGETING DDX3; GENERATION; IDENTIFICATION; MANAGEMENT; DISCOVERY;
D O I
10.3390/biom10060857
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DDX3 belongs to RNA helicase family that demonstrates oncogenic properties and has gained wider attention due to its role in cancer progression, proliferation and transformation. Mounting reports have evidenced the role of DDX3 in cancers making it a promising target to abrogate DDX3 triggered cancers. Dual pharmacophore models were generated and were subsequently validated. They were used as 3D queries to screen the InterBioScreen database, resulting in the selection of curcumin that was escalated to molecular dynamics simulation studies. In vitro anti-cancer analysis was conducted on three cell lines such as MCF-7, MDA-MB-231 and HeLa, which were evaluated along with exemestane. Curcumin was docked into the active site of the protein target (PDB code 2I4I) to estimate the binding affinity. The compound has interacted with two key residues and has displayed stable molecular dynamics simulation results. In vitro analysis has demonstrated that both the candidate compounds have reduced the expression of DDX3 in three cell lines. However, upon combinatorial treatment of curcumin (10 and 20 mu M) and exemestane (50 mu M) a synergism was exhibited, strikingly downregulating the DDX3 expression and has enhanced apoptosis in three cell lines. The obtained results illuminate the use of curcumin as an alternative DDX3 inhibitor and can serve as a chemical scaffold to design new small molecules.
引用
收藏
页数:17
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共 64 条
[1]   RNA, helicases: Regulators of differentiation [J].
Abdelhaleem, M .
CLINICAL BIOCHEMISTRY, 2005, 38 (06) :499-503
[2]  
Ahmad Aamir, 2013, ISRN Oncol, V2013, P290568, DOI 10.1155/2013/290568
[3]  
Akram M, 2017, BIOL RES, V50
[4]   Therapeutic Effects of Curcumin-From Traditional Past to Present and Future Clinical Applications [J].
Bachmeier, Beatrice E. ;
Melchart, Dieter .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 20 (15)
[5]   Identification of common functional configurations among molecules [J].
Barnum, D ;
Greene, J ;
Smellie, A ;
Sprague, P .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1996, 36 (03) :563-571
[6]   Targeting DDX3 with a small molecule inhibitor for lung cancer therapy [J].
Bol, Guus M. ;
Vesuna, Farhad ;
Xie, Min ;
Zeng, Jing ;
Aziz, Khaled ;
Gandhi, Nishant ;
Levine, Anne ;
Irving, Ashley ;
Korz, Dorian ;
Tantravedi, Saritha ;
van Voss, Marise R. Heerma ;
Gabrielson, Kathleen ;
Bordt, Evan A. ;
Polster, Brian M. ;
Cope, Leslie ;
van der Groep, Petra ;
Kondaskar, Atul ;
Rudek, Michelle A. ;
Hosmane, Ramachandra S. ;
van der Wall, Elsken ;
van Diest, Paul J. ;
Tran, Phuoc T. ;
Raman, Venu .
EMBO MOLECULAR MEDICINE, 2015, 7 (05) :648-669
[7]   Expression of the RNA Helicase DDX3 and the Hypoxia Response in Breast Cancer [J].
Bol, Guus M. ;
Raman, Venu ;
van der Groep, Petra ;
Vermeulen, Jeroen F. ;
Patel, Arvind H. ;
van der Wall, Elsken ;
van Diest, Paul J. .
PLOS ONE, 2013, 8 (05)
[8]   DDX3, a potential target for cancer treatment [J].
Bol, Guus Martinus ;
Xie, Min ;
Raman, Venu .
MOLECULAR CANCER, 2015, 14
[9]   Oncogenic role of DDX3 in breast cancer biogenesis [J].
Botlagunta, M. ;
Vesuna, F. ;
Mironchik, Y. ;
Raman, A. ;
Lisok, A. ;
Winnard, P., Jr. ;
Mukadam, S. ;
Van Diest, P. ;
Chen, J. H. ;
Farabaugh, P. ;
Patel, A. H. ;
Raman, V. .
ONCOGENE, 2008, 27 (28) :3912-3922
[10]   In vitro anti-cancer activity of doxorubicin against human RNA helicase, DDX3 [J].
Botlagunta, Mahendran ;
Kollapalli, Bhulakshmi ;
Kakarla, Lavanya ;
Gajarla, Siva Priya ;
Gade, Sai Pujitha ;
Dadi, Chandra Lekha ;
Penumadu, Akhila ;
Javeed, Shaik .
BIOINFORMATION, 2016, 12 (07) :347-353