Crystal structure of the proenzyme domain of plasminogen

被引:37
作者
Peisach, E
Wang, JY
de los Santos, T
Reich, E
Ringe, D [1 ]
机构
[1] Brandeis Univ, Dept Biochem, Waltham, MA 02454 USA
[2] Brandeis Univ, Dept Chem, Waltham, MA 02254 USA
[3] Brandeis Univ, Rosenstiel Basic Med Sci Res Ctr, Waltham, MA 02254 USA
[4] Brandeis Univ, Program Biophys & Struct Biol, Waltham, MA 02254 USA
[5] SUNY Stony Brook, Dept Pharmacol Sci, Stony Brook, NY 11794 USA
关键词
D O I
10.1021/bi991130r
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have solved the X-ray crystal structure of the proenzyme form of the catalytic domain of plasminogen, with the nonessential mutations M585Q, V673M, and M788L, to 2.0 Angstrom resolution. The structure presents an inactive protease characterized by Asp740 (chymotrypsinogen 194) hydrogen bonded to His586 (chymotrypsinogen 40), preventing proper formation of the oxyanion hole and SI specificity pocket. In addition, the catalytic triad residues are misplaced relative to the active conformation adopted by serine proteases in the chymotrypsin family. Finally, a unique form of zymogen inactivation is observed, characterized by a "foot-in-mouth" mechanism in which Trp761 (chymotrypsinogen 215) is folded into the S1 specificity pocket preventing substrate binding.
引用
收藏
页码:11180 / 11188
页数:9
相关论文
共 50 条
[31]   The crystal structure of TBC domain of human GapCenA [J].
Janowski, Robert ;
Boutin, Mailys ;
Coll, Miquel .
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2011, 67 :C222-C222
[32]   Crystal Structure of the Navβ4 Extracellular Domain [J].
Das, Samir ;
Gilchrist, John ;
Bosmans, Frank ;
Van Petegem, Filip .
BIOPHYSICAL JOURNAL, 2014, 106 (02) :37A-37A
[33]   Crystal structure of the dimerization domain of human filamin A [J].
Seo, Min-Duk ;
Seok, Seung-Hyeon ;
Im, Hookang ;
Kwon, Ae-Ran ;
Lee, Sang Jae ;
Kim, Hyung-Ryong ;
Cho, Yongicheol ;
Park, Dongeun ;
Lee, Bong-Jin .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2009, 75 (01) :258-263
[34]   Crystal Structure of Human Nocturnin Catalytic Domain [J].
Michael A. Estrella ;
Jin Du ;
Alexei Korennykh .
Scientific Reports, 8
[35]   DOMAIN STRUCTURE OF A COBALT-NICKEL CRYSTAL [J].
BOZORTH, RM ;
WALKER, JG .
PHYSICAL REVIEW, 1950, 79 (05) :888-888
[36]   Structure of a Bloch domain wall in a cubic crystal [J].
Antonyuk, OA ;
Tychko, AV ;
Kovalenko, VF .
PHYSICS OF THE SOLID STATE, 2004, 46 (05) :861-866
[37]   Crystal structure of the specificity domain of ribonuclease P [J].
Krasilnikov, AS ;
Yang, XJ ;
Pan, T ;
Mondragón, A .
NATURE, 2003, 421 (6924) :760-764
[38]   Crystal structure of the specificity domain of ribonuclease P [J].
Andrey S. Krasilnikov ;
Xiaojing Yang ;
Tao Pan ;
Alfonso Mondragón .
Nature, 2003, 421 :760-764
[39]   Crystal structure of the catalytic domain of human RPTPH [J].
Kim, Myeongbin ;
Ryu, Seong Eon .
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2022, 78 :265-269
[40]   Crystal Structure of Human Nocturnin Catalytic Domain [J].
Estrella, Michael A. ;
Du, Jin ;
Korennykh, Alexei .
SCIENTIFIC REPORTS, 2018, 8