Molecular Modeling of the Human Hemoglobin-Haptoglobin Complex Sheds Light on the Protective Mechanisms of Haptoglobin

被引:14
|
作者
Nantasenamat, Chanin [1 ,2 ]
Prachayasittikul, Virapong [2 ]
Bulow, Leif [3 ]
机构
[1] Mahidol Univ, Fac Med Technol, Ctr Data Min & Biomed Informat, Bangkok 10700, Thailand
[2] Mahidol Univ, Fac Med Technol, Dept Clin Microbiol & Appl Technol, Bangkok 10700, Thailand
[3] Lund Univ, Dept Chem, Lund, Sweden
来源
PLOS ONE | 2013年 / 8卷 / 04期
关键词
PROTEIN-PROTEIN INTERACTIONS; AMINO-AROMATIC INTERACTIONS; CATION-PI INTERACTIONS; BINDING-SITE; ALPHA-CHAIN; HOT-SPOTS; RESIDUES; DOCKING; RECOGNITION; PLASMA;
D O I
10.1371/journal.pone.0062996
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Hemoglobin (Hb) plays a critical role in human physiological function by transporting O-2. Hb is safe and inert within the confinement of the red blood cell but becomes reactive and toxic upon hemolysis. Haptoglobin (Hp) is an acute-phase serum protein that scavenges Hb and the resulting Hb-Hp complex is subjected to CD163-mediated endocytosis by macrophages. The interaction between Hb and Hp is extraordinarily strong and largely irreversible. As the structural details of the human Hb-Hp complex are not yet available, this study reports for the first time on insights of the binding modalities and molecular details of the human Hb-Hp interaction by means of protein-protein docking. Furthermore, residues that are pertinent for complex formation were identified by computational alanine scanning mutagenesis. Results revealed that the surface of the binding interface of Hb-Hp is not flat and protrudes into each binding partner. It was also observed that the secondary structures at the Hb-Hp interface are oriented as coils and alpha-helices. When dissecting the interface in more detail, it is obvious that several tyrosine residues of Hb, particularly beta 145Tyr, alpha 42Tyr and alpha 140Tyr, are buried in the complex and protected from further oxidative reactions. Such finding opens up new avenues for the design of Hp mimics which may be used as alternative clinical Hb scavengers.
引用
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页数:11
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