A Chinese White Pear (Pyrus bretschneideri) BZR Gene PbBZR1 Act as a Transcriptional Repressor of Lignin Biosynthetic Genes in Fruits

被引:22
作者
Cao, Yunpeng [1 ,3 ,4 ]
Meng, Dandan [4 ]
Li, Xiaoxu [5 ]
Wang, Lihu [6 ]
Cai, Yongping [4 ]
Jiang, Lan [2 ]
机构
[1] Cent South Univ Forestry & Technol, Key Lab Cultivat & Protect Nonwood Forest Trees, Minist Educ, Changsha, Peoples R China
[2] Wannan Med Coll, Cent Lab, Yijishan Hosp, Wuhu, Peoples R China
[3] Cent South Univ Forestry & Technol, Coll Forestry, Key Lab Nonwood Forest Prod, State Forestry Adm, Changsha, Peoples R China
[4] Anhui Agr Univ, Sch Life Sci, Hefei, Peoples R China
[5] China Tobacco Hunan Ind Co Ltd, Technol Ctr, Changsha, Peoples R China
[6] Hebei Univ Engn, Coll Landscape & Ecol Engn, Handan, Peoples R China
基金
中国国家自然科学基金;
关键词
BZR; expression; microsynteny; duplication; transcriptional repressors; STRESS-INDUCED EXPRESSION; PHYLOGENETIC ANALYSIS; MAXIMUM-LIKELIHOOD; FACTOR FAMILY; KINASE; BRASSINOSTEROIDS; GENOME; GROWTH; BIN2; EVOLUTION;
D O I
10.3389/fpls.2020.01087
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
BZR transcription factors play essential roles in plant growth and environmental stimuli, and they are also the positive regulators of Brassinosteroid (BR) signal transduction in diverse plants. In addition, BZR TFs, as crucial regulators of BR synthesis, may have multiple stress-resistance functions and their related regulatory mechanisms have been well illustrated in model plants. Here, we carried out a genome-wide identification ofBZRmembers in Chinese pear (Pyrus bretschneideri) and identified 13 members. By comparative analysis in five Rosaceae genomes,BZRmembers in the pear genome may have undergone large-scale duplication events during evolution. Purifying selection played an important role in almost all of the orthologous and paralogous gene pairs. According to the expression analysis of thePbBZRsduring fruit development, threePbBZRswere selected for detailed analysis. Transcriptional activation assays presented thatPbBZR1repressed the promoters ofP. bretschneiderilignin biosynthetic genes, such asPbCES9,PbCOMT3, andPbHCT6. Our study traces the evolution ofBZRgene family members in Rosaceae genomes and illustrates that the rates of gene loss and gain are far from equilibrium in different species. At the same time, our results suggest thatPbBZR1may be involved in the negative regulation of lignin biosynthesis.
引用
收藏
页数:13
相关论文
共 66 条
[1]  
Bateman A, 2002, NUCLEIC ACIDS RES, V30, P276, DOI [10.1093/nar/gkh121, 10.1093/nar/gkp985, 10.1093/nar/gkr1065]
[2]   We are good to grow: dynamic integration of cell wall architecture with the machinery of growth [J].
Benatti, Matheus R. ;
Penning, Bryan W. ;
Carpita, Nicholas C. ;
McCann, Maureen C. .
FRONTIERS IN PLANT SCIENCE, 2012, 3
[3]   Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events [J].
Bowers, JE ;
Chapman, BA ;
Rong, JK ;
Paterson, AH .
NATURE, 2003, 422 (6930) :433-438
[4]   MicroSyn: A user friendly tool for detection of microsynteny in a gene family [J].
Cai, Bin ;
Yang, Xiaohan ;
Tuskan, Gerald A. ;
Cheng, Zong-Ming .
BMC BIOINFORMATICS, 2011, 12
[5]   Integrative Analysis of the Core Fruit Lignification Toolbox in Pear Reveals Targets for Fruit Quality Bioengineering [J].
Cao, Yunpeng ;
Li, Xiaoxu ;
Jiang, Lan .
BIOMOLECULES, 2019, 9 (09)
[6]   Comparative and Expression Analysis of Ubiquitin Conjugating Domain-Containing Genes in Two Pyrus Species [J].
Cao, Yunpeng ;
Meng, Dandan ;
Chen, Yu ;
Abdullah, Muhammad ;
Jin, Qing ;
Lin, Yi ;
Cai, Yongping .
CELLS, 2018, 7 (07)
[7]   Genome-Wide Analysis Suggests the Relaxed Purifying Selection Affect the Evolution of WOX Genes in Pyrus bretschneideri, Prunus persica, Prunus mume, and Fragaria vesca [J].
Cao, Yunpeng ;
Han, Yahui ;
Meng, Dandan ;
Li, Guohui ;
Li, Dahui ;
Abdullah, Muhammad ;
Jin, Qing ;
Lin, Yi ;
Cai, Yongping .
FRONTIERS IN GENETICS, 2017, 8
[8]   Structural, Evolutionary, and Functional Analysis of the Class III Peroxidase Gene Family in Chinese Pear (Pyrus bretschneideri) [J].
Cao, Yunpeng ;
Han, Yahui ;
Meng, Dandan ;
Li, Dahui ;
Jin, Qing ;
Lin, Yi ;
Cai, Yongping .
FRONTIERS IN PLANT SCIENCE, 2016, 7
[9]   Systematic Analysis of the 4-Coumarate: Coenzyme A Ligase (4CL) Related Genes and Expression Profiling during Fruit Development in the Chinese Pear [J].
Cao, Yunpeng ;
Han, Yahui ;
Li, Dahui ;
Lin, Yi ;
Cai, Yongping .
GENES, 2016, 7 (10)
[10]   Comparative Genomic Analysis of the GRF Genes in Chinese Pear (Pyrus bretschneideri Rehd), Poplar (Populous), Grape (Vitis vinifera), Arabidopsis and Rice (Oryza sativa) [J].
Cao, Yunpeng ;
Hang, Yahui ;
Jin, Qing ;
Lin, Yi ;
Cai, Yongping .
FRONTIERS IN PLANT SCIENCE, 2016, 7