Complete mitochondrial genome of the Moltrecht's minnow, Aphyocypris moltrechti (Teleostei, Cyprinidae), in comparison with A. kikuchii

被引:9
作者
Jang-Liaw, Nian-Hong [1 ]
Tsai, Chi-Li [2 ]
Chang, Chia-Hao [3 ,4 ]
Watanabe, Katsutoshi [5 ]
机构
[1] Natl Taiwan Ocean Univ, Inst Marine Biol, Keelung 20224, Taiwan
[2] Endem Species Res Inst, Jiji 55244, Nantou, Taiwan
[3] Acad Sinica, Biodivers Res Ctr, Taipei 11529, Taiwan
[4] Natl Chiao Tung Univ, Dept Biol Sci & Technol, Hsinchu 30010, Taiwan
[5] Kyoto Univ, Grad Sch Sci, Kyoto 6068502, Japan
来源
MITOCHONDRIAL DNA | 2013年 / 24卷 / 02期
关键词
Complete mitochondrial genome; Moltrecht's minnow; Taiwan; DNA-SEQUENCES; CYPRINIFORMES; PHYLOGENIES;
D O I
10.3109/19401736.2012.731403
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We sequenced the complete mitochondrial genome of the Moltrecht's minnow, Aphyocypris moltrechti, which is known as an endemic species to Taiwan. The complete mitochondrial genome is 16,617 bp in size, consisting of 37 genes coding for 13 proteins, 2 rRNAs, 22 tRNAs, and 1 control region. Its gene arrangement pattern was identical with most vertebrates. We compared the mitochondrial genome of A. moltrechti with that of the Kikuchi's minnow, Aphyocypris kikuchii, which had been considered closely related to A. moltrechti within a same genus. Nucleotide sequence divergence (K2P distance) between the two whole mitochondrial genomes was 11.62%. The detailed comparison between the mitochondrial genomes of two species was done.
引用
收藏
页码:117 / 119
页数:3
相关论文
共 12 条
[1]   Tandem repeats finder: a program to analyze DNA sequences [J].
Benson, G .
NUCLEIC ACIDS RESEARCH, 1999, 27 (02) :573-580
[2]   Animal mitochondrial genomes [J].
Boore, JL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (08) :1767-1780
[3]   Complete mitochondrial genome of the Kikuchi's minnow Aphyocypris kikuchii (Teleostei, Cyprinidae) [J].
Jang-Liaw, Nian-Hong ;
Tsai, Chi-Li ;
Watanabe, Katsutoshi .
MITOCHONDRIAL DNA, 2013, 24 (01) :11-13
[5]   The complete mitochondrial genome of the spotted steed, Hemibarbus maculatus (Teleostei, Cypriniformes) [J].
Li, Ping ;
Xu, Dandan ;
Peng, Zuogang ;
Zhang, Yaoguang .
MITOCHONDRIAL DNA, 2012, 23 (01) :34-36
[6]   Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences [J].
Miya, M ;
Takeshima, H ;
Endo, H ;
Ishiguro, NB ;
Inoue, JG ;
Mukai, T ;
Satoh, TP ;
Yamaguchi, M ;
Kawaguchi, A ;
Mabuchi, K ;
Shirai, SM ;
Nishida, M .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 26 (01) :121-138
[7]   Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences [J].
Miya, M ;
Kawaguchi, A ;
Nishida, M .
MOLECULAR BIOLOGY AND EVOLUTION, 2001, 18 (11) :1993-2009
[8]   The complete mitochondrial DNA sequence of the basal Hexapod Tetrodontophora bielanensis:: Evidence for heteroplasmy and tRNA translocations [J].
Nardi, F ;
Carapelli, A ;
Fanciulli, PP ;
Dallai, R ;
Frati, F .
MOLECULAR BIOLOGY AND EVOLUTION, 2001, 18 (07) :1293-1304
[9]  
Regan C. T., 1908, ANN MAG NAT HIST, V2, P358, DOI DOI 10.1080/00222930808692494
[10]   Mitogenomic evolution and interrelationships of the cypriniformes (Actinopterygii: Ostariophysi):: The first evidence toward resolution of higher-level relationships of the world's largest freshwater fish clade based on 59 whole mitogenome sequences [J].
Saitoh, K. ;
Sado, T. ;
Mayden, R. L. ;
Hanzawa, N. ;
Nakamura, K. ;
Nishida, M. ;
Miya, M. .
JOURNAL OF MOLECULAR EVOLUTION, 2006, 63 (06) :826-841