Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling

被引:11
作者
Reyes-Palomares, Armando [1 ,2 ]
Montanez, Raul [1 ,2 ]
Real-Chicharro, Alejando [1 ,2 ]
Chniber, Othmane [3 ]
Kerzazi, Amine [3 ]
Navas-Delgado, Ismael [3 ]
Medina, Miguel Angel [1 ,2 ]
Aldana-Montes, Jose F. [3 ]
Sanchez-Jimenez, Francisca [1 ,2 ]
机构
[1] CIBER Enfermedades Raras, Dept Mol Biol & Biochem, Bellaterra 29071, Spain
[2] CIBER Enfermedades Raras, Unit 741, Bellaterra 29071, Spain
[3] Univ Malaga, Dept Comp Languages & Computat Sci, E-29071 Malaga, Spain
关键词
D O I
10.1093/bioinformatics/btp061
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present Systems Biology Metabolic Modeling Assistant (SBMM Assistant), a tool built using an ontology-based mediator, and designed to facilitate metabolic modeling through the integration of data from repositories that contain valuable metabolic information. This software can be used for the visualization, design and management of metabolic networks; selection, integration and storage of metabolic information; and as an assistant for kinetic modeling.
引用
收藏
页码:834 / 835
页数:2
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