Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica

被引:9
作者
Roldan, Diego M. [1 ,2 ]
Kyrpides, Nikos [3 ]
Woyke, Tanja [3 ]
Shapiro, Nicole [3 ]
Whitman, William B. [4 ]
Kralova, Stanislava [5 ]
Sedlacek, Ivo [5 ]
Busse, Hans-Juergen [6 ]
Menes, Rodolfo Javier [1 ,2 ]
机构
[1] Univ Republica, Lab Ecol Microbiana Medioambiental, Microbiol, Fac Quim, Montevideo, Uruguay
[2] Univ Republica, Unidad Asociada Inst Quim Biol, Fac Ciencias, Montevideo, Uruguay
[3] DOE Joint Genom Inst, Walnut Creek, CA 94598 USA
[4] Univ Georgia, Dept Microbiol, Athens, GA 30602 USA
[5] Masaryk Univ, Dept Expt Biol, Czech Collect Microorganisms, Brno, Czech Republic
[6] Vet Med Univ Wien, Inst Mikrobiol, Vet Pl 1, A-1210 Vienna, Austria
关键词
Hyrnenobacter; psychrophiles; bacterial colonization; airborne bacteria; maritime Antarctica; oligotrophy; EMENDED DESCRIPTION; LIPID-COMPOSITION; CLASSIFICATION; BACTERIA; PROPOSAL; SANDSTONE; SEQUENCES; DATABASE; FAMILY; TAXA;
D O I
10.1099/ijsem.0.004362
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A rod-shaped and Gram-stain-negative bacterial strain, 1B(T), was isolated from an air sample collected at King George Island, maritime Antarctica. Strain 1B(T) is strictly aerobic, psychrophilic, catalase-positive, oxidase-positive and non-motile. Growth of strain 1B(T) is observed at 0-20 degrees C (optimum, 10 degrees C), pH 6.0-8.0 (optimum, pH 8.0) and in the presence of 0-1.0% NaCl (optimum. 0.5% NaCl). Phylogenetic analysis based on 16S rRNA gene sequences places strain 1B(T) within the genus Hymenobacter and shows the highest similarity to Hymenobacter antarcticus VUG-A42aa(T) (97.5%). The predominant menaquinone of strain 1B(T) is MK-7 and the major fatty acids (>10%) comprise summed feature 3 (C-16 omega 7c and/or C-16:1 omega 6c; 32.5%), iso-C-15:0 (17.6%) and anteiso C-15:0 (12.3%). The polar lipid profile consists of the major compounds phosphatidylethanolamine, phosphatidylserine. two unidentified aminolipids and one unidentified phospholipid. The DNA G+C content based on the draft genome sequence is 61.2 mol%. Based on the data from the current polyphasic study, 1B(T) represents a novel species of the genus Hymenobacter, for which the name Hymenobacter artigasi sp. nov. is suggested. The type strain is 1B(T) (=CCM 8970(T)=CGMCC(T)=1.1 6843(T)).
引用
收藏
页码:4935 / 4941
页数:7
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