Kirkwood-Buff analysis of aqueous N-methylacetamide and acetamide solutions modeled by the CHARMM additive and Drude polarizable force fields

被引:31
作者
Lin, Bin [1 ]
Lopes, Pedro E. M. [1 ]
Roux, Benoit [2 ]
MacKerell, Alexander D., Jr. [1 ]
机构
[1] Univ Maryland, Sch Pharm, Dept Pharmaceut Sci, Baltimore, MD 21201 USA
[2] Univ Chicago, Dept Biochem & Mol Biol, Chicago, IL 60637 USA
关键词
MOLECULAR-DYNAMICS SIMULATIONS; GAS ELECTRON-DIFFRACTION; TEMPERATURE; 313.15; K; METHANOL PLUS WATER; LIQUID WATER; OSCILLATOR MODEL; UREA SOLUTIONS; MIXTURES; AMIDES; SOLVATION;
D O I
10.1063/1.4818731
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Kirkwood-Buff analysis was performed on aqueous solutions of N-methylacetamide and acetamide using the Chemistry at HARvard Molecular Mechanics additive and Drude polarizable all-atom force fields. Comparison of a range of properties with experimental results, including Kirkwood-Buff integrals, excess coordination numbers, solution densities, partial molar values, molar enthalpy of mixing, showed both models to be well behaved at higher solute concentrations with the Drude model showing systematic improvement at lower solution concentrations. However, both models showed difficulties reproducing experimental activity derivatives and the excess Gibbs energy, with the Drude model performing slightly better. At the molecular level, the improved agreement of the Drude model at low solute concentrations is due to increased structure in the solute-solute and solute-solvent interactions. The present results indicate that the explicit inclusion of electronic polarization leads to improved modeling of dilute solutions even when those properties are not included as target data during force field optimization. (C) 2013 AIP Publishing LLC.
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页数:11
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