MYC Drives Temporal Evolution of Small Cell Lung Cancer Subtypes by Reprogramming Neuroendocrine Fate

被引:333
作者
Ireland, Abbie S. [1 ]
Micinski, Alexi M. [1 ]
Kastner, David W. [1 ]
Guo, Bingqian [1 ]
Wait, Sarah J. [1 ]
Spainhower, Kyle B. [1 ]
Conley, Christopher C. [2 ]
Chen, Opal S. [3 ]
Guthrie, Matthew R. [1 ]
Soltero, Danny [1 ]
Qiao, Yi [4 ]
Huang, Xiaomeng [4 ]
Tarapcsak, Szabolcs [4 ]
Devarakonda, Siddhartha [5 ]
Chalishazar, Milind D. [1 ]
Gertz, Jason [1 ]
Moser, Justin C. [6 ]
Marth, Gabor [4 ]
Puri, Sonam [7 ]
Witt, Benjamin L. [8 ,9 ]
Spike, Benjamin T. [1 ]
Oliver, Trudy G. [1 ]
机构
[1] Univ Utah, Huntsman Canc Inst, Dept Oncol Sci, Salt Lake City, UT 84112 USA
[2] Univ Utah, Huntsman Canc Inst, Huntsman Canc Inst Bioinformat Anal Shared Resour, Salt Lake City, UT 84112 USA
[3] Univ Utah, Huntsman Canc Inst, Huntsman Canc Inst High Throughput Genom Shared R, Salt Lake City, UT 84112 USA
[4] Univ Utah, Eccles Inst Human Genet, Utah Ctr Genet Discovery, Salt Lake City, UT 84112 USA
[5] Washington Univ, Sch Med, Dept Med, Div Med Oncol, St Louis, MO 63110 USA
[6] HonorHlth Res Inst, Scottsdale, AZ 85254 USA
[7] Univ Utah, Dept Internal Med, Salt Lake City, UT 84112 USA
[8] Univ Utah, Dept Pathol, Salt Lake City, UT 84112 USA
[9] Univ Utah, ARUP Labs, Salt Lake City, UT 84108 USA
关键词
EPITHELIAL-CELLS; HETEROGENEITY; GENOME; ORIGIN; EXPRESSION; MODELS; LINES; DIFFERENTIATION; INACTIVATION; PROGRESSION;
D O I
10.1016/j.ccell.2020.05.001
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Small cell lung cancer (SCLC) is a neuroendocrine tumor treated clinically as a single disease with poor outcomes. Distinct SCLC molecular subtypes have been defined based on expression of ASCL1, NEUROD1, POU2F3, or YAP1. Here, we use mouse and human models with a time-series single-cell transcriptome analysis to reveal that MYC drives dynamic evolution of SCLC subtypes. In neuroendocrine cells, MYC activates Notch to dedifferentiate tumor cells, promoting a temporal shift in SCLC from ASCL1(+) to NEUROD1(+) to YAP1(+) states. MYC alternatively promotes POU2F3(+) tumors from a distinct cell type. Human SCLC exhibits intratumoral subtype heterogeneity, suggesting that this dynamic evolution occurs in patient tumors. These findings suggest that genetics, cell of origin, and tumor cell plasticity determine SCLC subtype.
引用
收藏
页码:60 / +
页数:31
相关论文
共 83 条
[1]   destiny: diffusion maps for large-scale single cell data in R [J].
Angerer, Philipp ;
Haghverdi, Laleh ;
Buettner, Maren ;
Theis, Fabian J. ;
Marr, Carsten ;
Buettner, Florian .
BIOINFORMATICS, 2016, 32 (08) :1241-1243
[2]  
[Anonymous], 2011, EMBNET J, DOI DOI 10.1108/IJEBR.2011.16017BAA.001
[3]   Targeting NOTCH activation in small cell lung cancer through LSD1 inhibition [J].
Augert, Arnaud ;
Eastwood, Emily ;
Ibrahim, Ali H. ;
Wu, Nan ;
Grunblatt, Eli ;
Basom, Ryan ;
Liggitt, Denny ;
Eaton, Keith D. ;
Martins, Renato ;
Poirier, John T. ;
Rudin, Charles M. ;
Milletti, Francesca ;
Cheng, Wei-Yi ;
Mack, Fiona ;
MacPherson, David .
SCIENCE SIGNALING, 2019, 12 (567)
[4]   ASCL1 and NEUROD1 Reveal Heterogeneity in Pulmonary Neuroendocrine Tumors and Regulate Distinct Genetic Programs [J].
Borromeo, Mark D. ;
Savage, Trisha K. ;
Kollipara, Rahul K. ;
He, Min ;
Augustyn, Alexander ;
Osborne, Jihan K. ;
Girard, Luc ;
Minna, John D. ;
Gazdar, Adi F. ;
Cobb, Melanie H. ;
Johnson, Jane E. .
CELL REPORTS, 2016, 16 (05) :1259-1272
[5]   Family matters: How MYC family oncogenes impact small cell lung cancer [J].
Braegelmann, Johannes ;
Boehm, Stefanie ;
Guthrie, Matthew R. ;
Mollaoglu, Gurkan ;
Oliver, Trudy G. ;
Sos, Martin L. .
CELL CYCLE, 2017, 16 (16) :1489-1498
[6]   Integrating single-cell transcriptomic data across different conditions, technologies, and species [J].
Butler, Andrew ;
Hoffman, Paul ;
Smibert, Peter ;
Papalexi, Efthymia ;
Satija, Rahul .
NATURE BIOTECHNOLOGY, 2018, 36 (05) :411-+
[7]  
Cancer Genome Atlas Research Network, 2018, Nature, V559, pE12, DOI [10.1038/nature13385, 10.1038/s41586-018-0228-6]
[8]   Protein expression of TTF1 and cMYC define distinct molecular subgroups of small cell lung cancer with unique vulnerabilities to aurora kinase inhibition, DLL3 targeting, and other targeted therapies [J].
Cardnell, Robert J. ;
Li, Lerong ;
Sen, Triparna ;
Bara, Rasha ;
Tong, Pan ;
Fujimoto, Junya ;
Ireland, Abbie S. ;
Guthrie, Matthew R. ;
Bheddah, Sheila ;
Banerjee, Upasana ;
Kalu, Nene N. ;
Fan, You-Hong ;
Dylla, Scott J. ;
Johnson, Faye M. ;
Wistuba, Ignacio I. ;
Oliver, Trudy G. ;
Heymach, John V. ;
Glisson, Bonnie S. ;
Wang, Jing ;
Byers, Lauren A. .
ONCOTARGET, 2017, 8 (43) :73419-73432
[9]  
CARNEY DN, 1985, CANCER RES, V45, P2913
[10]   MYC-Driven Small-Cell Lung Cancer is Metabolically Distinct and Vulnerable to Arginine Depletion [J].
Chalishazar, Milind D. ;
Wait, Sarah J. ;
Huang, Fang ;
Ireland, Abbie S. ;
Mukhopadhyay, Anandaroop ;
Lee, Younjee ;
Schuman, Sophia S. ;
Guthrie, Matthew R. ;
Berrett, Kristofer C. ;
Vahrenkamp, Jeffery M. ;
Hu, Zeping ;
Kudla, Marek ;
Modzelewska, Katarzyna ;
Wang, Guoying ;
Ingolia, Nicholas T. ;
Gertz, Jason ;
Lum, David H. ;
Cosulich, Sabina C. ;
Bomalaski, John S. ;
DeBerardinis, Ralph J. ;
Oliver, Trudy G. .
CLINICAL CANCER RESEARCH, 2019, 25 (16) :5107-5121