Structural landscape of the proline-rich domain of Sos1 nucleotide exchange factor

被引:7
|
作者
McDonald, Caleb B. [1 ]
Bhat, Vikas [1 ]
Kurouski, Dmitry [2 ]
Mikles, David C. [1 ]
Deegan, Brian J. [1 ]
Seldeen, Kenneth L. [1 ]
Lednev, Igor K. [2 ]
Farooq, Amjad [1 ]
机构
[1] Univ Miami, Dept Biochem & Mol Biol, Leonard Miller Sch Med, Miami, FL 33136 USA
[2] SUNY Albany, Dept Chem, Albany, NY 12222 USA
基金
美国国家卫生研究院;
关键词
Proline-rich proteins; Structural disorder; Random coil; Polyproline II helices; Conformational dynamics; INTRINSICALLY UNSTRUCTURED PROTEINS; RANDOM-COIL BEHAVIOR; RAS ACTIVATOR SON; DISORDERED PROTEINS; UNFOLDED PROTEINS; FORCE-FIELD; RHO GTPASES; BINDING; OSMOLYTE; AUTOINHIBITION;
D O I
10.1016/j.bpc.2013.02.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Despite its key role in mediating a plethora of cellular signaling cascades pertinent to health and disease, little is known about the structural landscape of the proline-rich (PR) domain of Sos1 guanine nucleotide exchange factor. Herein, using a battery of biophysical tools, we provide evidence that the PR domain of Sos1 is structurally disordered and adopts an extended random coil-like conformation in solution. Of particular interest is the observation that while chemical denaturation of PR domain results in the formation of a significant amount of polyproline II (PPII) helices, it has little or negligible effect on its overall size as measured by its hydrodynamic radius. Our data also show that the PR domain displays a highly dynamic conformational basin in agreement with the knowledge that the intrinsically unstructured proteins rapidly interconvert between an ensemble of conformations. Collectively, our study provides new insights into the conformational equilibrium of a key signaling molecule with important consequences on its physiological function. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:54 / 62
页数:9
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