Evolvability Tradeoffs in Emergent Digital Replicators

被引:3
作者
LaBar, Thomas [1 ,2 ]
Hintze, Arend [3 ,4 ]
Adami, Christoph [5 ,6 ]
机构
[1] Michigan State Univ, Dept Microbiol & Mol Genet, BEACON Ctr Study Evolut Act, E Lansing, MI 48824 USA
[2] Michigan State Univ, Program Ecol Evolutionary Biol & Behav, E Lansing, MI 48824 USA
[3] Michigan State Univ, BEACON Ctr Study Evolut Act, Dept Integrat Biol, E Lansing, MI 48824 USA
[4] Michigan State Univ, Dept Comp Sci & Engn, E Lansing, MI 48824 USA
[5] Michigan State Univ, Dept Microbiol & Mol Genet, BEACON Ctr Study Evolut Act, Program Ecol Evolutionary Biol & Behav, E Lansing, MI 48824 USA
[6] Michigan State Univ, Dept Phys & Astron, E Lansing, MI 48824 USA
关键词
Evolvability; digital life; origin of life; FITNESS LANDSCAPES; EVOLUTION; ROBUSTNESS; ORIGIN; LIFE; ADAPTATION; OFFS;
D O I
10.1162/ARTL_a_00214
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
The role of historical contingency in the origin of life is one of the great unknowns in modern science. Only one example of life existsone that proceeded from a single self-replicating organism (or a set of replicating hypercycles) to the vast complexity we see today in Earth's biosphere. We know that emergent life has the potential to evolve great increases in complexity, but it is unknown if evolvability is automatic given any self-replicating organism. At the same time, it is difficult to test such questions in biochemical systems. Laboratory studies with RNA replicators have had some success with exploring the capacities of simple self-replicators, but these experiments are still limited in both capabilities and scope. Here, we use the digital evolution system Avida to explore the interplay between emergent replicators (rare randomly assembled self-replicators) and evolvability. We find that we can classify fixed-length emergent replicators in Avida into two classes based on functional analysis. One class is more evolvable in the sense of optimizing the replicators' replication abilities. However, the other class is more evolvable in the sense of acquiring evolutionary innovations. We tie this tradeoff in evolvability to the structure of the respective classes' replication machinery, and speculate on the relevance of these results to biochemical replicators.
引用
收藏
页码:483 / 498
页数:16
相关论文
共 63 条
[1]   Evolution of biological complexity [J].
Adami, C ;
Ofria, C ;
Collier, TC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (09) :4463-4468
[2]  
Adami C., 1998, Introduction to artificial life
[3]  
Adami C, 2017, INFORM CAUSALITY MAT, P95
[4]   Information-Theoretic Considerations Concerning the Origin of Life [J].
Adami, Christoph .
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 2015, 45 (03) :309-317
[5]  
Ancel LW, 2000, J EXP ZOOL, V288, P242, DOI 10.1002/1097-010X(20001015)288:3<242::AID-JEZ5>3.0.CO
[6]  
2-O
[7]   Experimental fitness landscapes to understand the molecular evolution of RNA-based life [J].
Athavale, Shreyas S. ;
Spicer, Brad ;
Chen, Irene A. .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2014, 22 :35-39
[8]   Evolution of evolvability via adaptation of mutation rates [J].
Bedau, MA ;
Packard, NH .
BIOSYSTEMS, 2003, 69 (2-3) :143-162
[9]   TEMPLATE-FREE RNA-SYNTHESIS BY Q-BETA REPLICASE [J].
BIEBRICHER, CK ;
EIGEN, M ;
LUCE, R .
NATURE, 1986, 321 (6065) :89-91
[10]   SEQUENCE-ANALYSIS OF RNA SPECIES SYNTHESIZED BY Q-BETA REPLICASE WITHOUT TEMPLATE [J].
BIEBRICHER, CK ;
LUCE, R .
BIOCHEMISTRY, 1993, 32 (18) :4848-4854