Implementing Deep Learning Algorithms in Anatomic Pathology Using Open-source Deep Learning Libraries

被引:1
|
作者
McAlpine, Ewen [1 ,2 ]
Michelow, Pamela [1 ,2 ]
机构
[1] Univ Witwatersrand, Sch Pathol, Div Anat Pathol, Johannesburg, South Africa
[2] Natl Hlth Lab Serv, Dept Anat Pathol, Johannesburg, South Africa
关键词
digital pathology; artificial intelligence; machine learning;
D O I
10.1097/PAP.0000000000000265
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
The application of artificial intelligence technologies to anatomic pathology has the potential to transform the practice of pathology, but, despite this, many pathologists are unfamiliar with how these models are created, trained, and evaluated. In addition, many pathologists may feel that they do not possess the necessary skills to allow them to embark on research into this field. This article aims to act as an introductory tutorial to illustrate how to create, train, and evaluate simple artificial learning models (neural networks) on histopathology data sets in the programming languagePythonusing the popular freely available, open-source librariesKeras,TensorFlow,PyTorch, andDetecto. Furthermore, it aims to introduce pathologists to commonly used terms and concepts used in artificial intelligence.
引用
收藏
页码:260 / 268
页数:9
相关论文
共 50 条
  • [21] Detecting Fake News using Machine Learning and Deep Learning Algorithms
    Abdullah-All-Tanvir
    Mahir, Ehesas Mia
    Akhter, Saima
    Huq, Mohammad Rezwanul
    2019 7TH INTERNATIONAL CONFERENCE ON SMART COMPUTING & COMMUNICATIONS (ICSCC), 2019, : 103 - 107
  • [22] Medical Imaging using Machine Learning and Deep Learning Algorithms: A Review
    Latif, Jahanzaib
    Xiao, Chuangbai
    Imran, Azhar
    Tu, Shanshan
    2019 2ND INTERNATIONAL CONFERENCE ON COMPUTING, MATHEMATICS AND ENGINEERING TECHNOLOGIES (ICOMET), 2019,
  • [23] Reproducibility in Deep Learning Algorithms for Digital Pathology applications: a case study using the CAMELYON16 datasets
    Li, Weizhe
    Chen, Weijie
    MEDICAL IMAGING 2021 - DIGITAL PATHOLOGY, 2021, 11603
  • [24] A Comprehensive Classification of Deep Learning Libraries
    Pandey, Hari Mohan
    Windridge, David
    THIRD INTERNATIONAL CONGRESS ON INFORMATION AND COMMUNICATION TECHNOLOGY, 2019, 797 : 427 - 435
  • [25] Medical image analysis using deep learning algorithms
    Li, Mengfang
    Jiang, Yuanyuan
    Zhang, Yanzhou
    Zhu, Haisheng
    FRONTIERS IN PUBLIC HEALTH, 2023, 11
  • [26] Challenges Developing Deep Learning Algorithms in Cytology
    McAlpine, Ewen David
    Pantanowitz, Liron
    Michelow, Pamela M.
    ACTA CYTOLOGICA, 2021, 65 (04) : 301 - 309
  • [27] Evaluation of multiple open-source deep learning models for detecting and grading COVID-19 on chest radiographs
    Risman, Alexander
    Trelles, Miguel
    Denning, David W.
    JOURNAL OF MEDICAL IMAGING, 2021, 8 (06)
  • [28] OpenPARF: An Open-source Placement and Routing Framework for Large-scale Heterogeneous FPGAs with Deep Learning Toolkit
    Mai J.
    Wang J.
    Di Z.
    Lin Y.
    Dianzi Yu Xinxi Xuebao/Journal of Electronics and Information Technology, 2023, 45 (09): : 3118 - 3131
  • [29] Survey of Federated Learning Open-Source Frameworks
    Lin W.
    Shi F.
    Zeng L.
    Li D.
    Xu Y.
    Liu B.
    Jisuanji Yanjiu yu Fazhan/Computer Research and Development, 2023, 60 (07): : 1551 - 1580
  • [30] Disease Inference on Medical Datasets Using Machine Learning and Deep Learning Algorithms
    Chinnaswamy, Arunkumar
    Srinivasan, Ramakrishnan
    Gaurang, Desai Prutha
    COMPUTATIONAL VISION AND BIO-INSPIRED COMPUTING, 2020, 1108 : 902 - 908