Study of molecular quantum similarity of enantiomers of amino acids

被引:25
作者
Boon, G
Van Alsenoy, C
De Proft, F
Bultinck, P
Geerlings, P
机构
[1] VUB, Fac Wetenscappen, ALGC, B-1050 Brussels, Belgium
[2] Univ Antwerp, Dept Chem, B-2610 Antwerp, Belgium
[3] Univ Ghent, Dept Inorgan & Phys Chem, B-9000 Ghent, Belgium
关键词
D O I
10.1021/jp060226+
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Molecular quantum similarity is evaluated for enantiomers in the case of molecules showing conformational flexibility, using our earlier proposed Boltzmann weighted similarity index. The conformers of the enantiomers of the amino acids alanine, asparagine, cysteine, leucine, serine, and valine were examined. Next to studying global indices, the evaluation of local similarity is carried out using our earlier proposed local similarity index based on the Hirshfeld partitioning, to further illustrate Mezey's holographic electron density theorem in chiral systems and to quantify dissimilarity of enantiomers.
引用
收藏
页码:5114 / 5120
页数:7
相关论文
共 45 条
[1]   Putting chirality to work: The strategy of chiral switches [J].
Agranat, I ;
Caner, H ;
Caldwell, A .
NATURE REVIEWS DRUG DISCOVERY, 2002, 1 (10) :753-768
[2]   Recent advances in the description of solvent effects with the polarizable continuum model [J].
Amovilli, C ;
Barone, V ;
Cammi, R ;
Cancès, E ;
Cossi, M ;
Mennucci, B ;
Pomelli, CS ;
Tomasi, J .
ADVANCES IN QUANTUM CHEMISTRY, VOL 32: QUANTUM SYSTEMS IN CHEMISTRY AND PHYSICS, PT II, 1998, 32 :227-261
[3]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[4]   The use of density functional theory-based reactivity descriptors in molecular similarity calculations [J].
Boon, G ;
De Proft, F ;
Langenaeker, W ;
Geerlings, P .
CHEMICAL PHYSICS LETTERS, 1998, 295 (1-2) :122-128
[5]   Molecular quantum similarity of enantiomers of amino acids: a case study [J].
Boon, G ;
Van Alsenoy, C ;
De Proft, F ;
Bultinck, P ;
Geerlings, P .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2005, 727 (1-3) :49-56
[6]   Similarity and chirality: Quantum chemical study of dissimilarity of enantiomers [J].
Boon, G ;
Van Alsenoy, C ;
De Proft, F ;
Bultinck, P ;
Geerlings, P .
JOURNAL OF PHYSICAL CHEMISTRY A, 2003, 107 (50) :11120-11127
[7]   A mathematical discussion on density and shape functions, vector semispaces and related questions [J].
Bultinck, P ;
Carbó-Dorca, R .
JOURNAL OF MATHEMATICAL CHEMISTRY, 2004, 36 (02) :191-200
[8]   Molecular quantum similarity:: Theory and applications [J].
Bultinck, P ;
Gironés, X ;
Carbó-Dorca, R .
REVIEWS IN COMPUTATIONAL CHEMISTRY, VOL 21, 2005, 21 :127-207
[9]   HOW SIMILAR IS A MOLECULE TO ANOTHER - AN ELECTRON-DENSITY MEASURE OF SIMILARITY BETWEEN 2 MOLECULAR-STRUCTURES [J].
CARBO, R ;
LEYDA, L ;
ARNAU, M .
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 1980, 17 (06) :1185-1189
[10]   Ab initio study of solvated molecules: A new implementation of the polarizable continuum model [J].
Cossi, M ;
Barone, V ;
Cammi, R ;
Tomasi, J .
CHEMICAL PHYSICS LETTERS, 1996, 255 (4-6) :327-335