Continuous diffusion signal, EAP and ODF estimation via Compressive Sensing in diffusion MRI

被引:71
作者
Merlet, Sylvain. L. [1 ]
Deriche, Rachid [1 ]
机构
[1] INRIA Sophia Antipolis Mediterranee, Athena Project Team, Sophia Antipolis, France
关键词
Compressive Sensing; MRI; Diffusion MRI; Orientation Distribution Function; Ensemble Average Propagator; White matter; ORIENTATION DISTRIBUTION FUNCTION; MODEL-FREE; RECONSTRUCTION;
D O I
10.1016/j.media.2013.02.010
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In this paper, we exploit the ability of Compressed Sensing (CS) to recover the whole 3D Diffusion MRI (dMRI) signal from a limited number of samples while efficiently recovering important diffusion features such as the Ensemble Average Propagator (EAP) and the Orientation Distribution Function (ODF). Some attempts to use CS in estimating diffusion signals have been done recently. However, this was mainly an experimental insight of CS capabilities in dMRI and the CS theory has not been fully exploited. In this work, we also propose to study the impact of the sparsity, the incoherence and the RIP property on the reconstruction of diffusion signals. We show that an efficient use of the CS theory enables to drastically reduce the number of measurements commonly used in dMRI acquisitions. Only 20-30 measurements, optimally spread on several b-value shells, are shown to be necessary, which is less than previous attempts to recover the diffusion signal using CS. This opens an attractive perspective to measure the diffusion signals in white matter within a reduced acquisition time and shows that CS holds great promise and opens new and exciting perspectives in diffusion MRI (dMRI). (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:556 / 572
页数:17
相关论文
共 58 条
[1]   Reordering for Improved Constrained Reconstruction from Undersampled k-Space Data [J].
Adluru, Ganesh ;
DiBella, Edward V. R. .
INTERNATIONAL JOURNAL OF BIOMEDICAL IMAGING, 2008, 2008
[2]   Reconstruction of the Orientation Distribution Function in Single- and Multiple-Shell q-Ball Imaging Within Constant Solid Angle [J].
Aganj, Iman ;
Lenglet, Christophe ;
Sapiro, Guillermo ;
Yacoub, Essa ;
Ugurbil, Kamil ;
Harel, Noam .
MAGNETIC RESONANCE IN MEDICINE, 2010, 64 (02) :554-566
[3]   Measurement of fiber orientation distributions using high angular resolution diffusion imaging [J].
Anderson, AW .
MAGNETIC RESONANCE IN MEDICINE, 2005, 54 (05) :1194-1206
[4]   Efficient and robust computation of PDF features from diffusion MR signal [J].
Assemlal, Haz-Edine ;
Tschumperle, David ;
Brun, Luc .
MEDICAL IMAGE ANALYSIS, 2009, 13 (05) :715-729
[5]   MR DIFFUSION TENSOR SPECTROSCOPY AND IMAGING [J].
BASSER, PJ ;
MATTIELLO, J ;
LEBIHAN, D .
BIOPHYSICAL JOURNAL, 1994, 66 (01) :259-267
[6]   ESTIMATION OF THE EFFECTIVE SELF-DIFFUSION TENSOR FROM THE NMR SPIN-ECHO [J].
BASSER, PJ ;
MATTIELLO, J ;
LEBIHAN, D .
JOURNAL OF MAGNETIC RESONANCE SERIES B, 1994, 103 (03) :247-254
[7]   A Fast Iterative Shrinkage-Thresholding Algorithm for Linear Inverse Problems [J].
Beck, Amir ;
Teboulle, Marc .
SIAM JOURNAL ON IMAGING SCIENCES, 2009, 2 (01) :183-202
[8]   Accelerated diffusion spectrum imaging with compressed sensing using adaptive dictionaries [J].
Bilgic, Berkin ;
Setsompop, Kawin ;
Cohen-Adad, Julien ;
Yendiki, Anastasia ;
Wald, Lawrence L. ;
Adalsteinsson, Elfar .
MAGNETIC RESONANCE IN MEDICINE, 2012, 68 (06) :1747-1754
[9]   Sparsity and incoherence in compressive sampling [J].
Candes, Emmanuel ;
Romberg, Justin .
INVERSE PROBLEMS, 2007, 23 (03) :969-985
[10]   The restricted isometry property and its implications for compressed sensing [J].
Candes, Emmanuel J. .
COMPTES RENDUS MATHEMATIQUE, 2008, 346 (9-10) :589-592