Arcobacter cloacae sp nov and Arcobacter suis sp nov., two new species isolated from food and sewage

被引:68
作者
Levican, Arturo [1 ]
Collado, Luis [2 ]
Jose Figueras, Maria [1 ]
机构
[1] Univ Rovira & Virgili, Dept Ciencies Med Basiques, Fac Med & Ciencies Salut, Unitat Microbiol,IISPV, E-43201 Reus, Spain
[2] Univ Austral Chile, Inst Biochem & Microbiol, Fac Sci, Valdivia, Chile
关键词
Arcobacter; Food; Sewage; MLPA; gyrA-atpA-rpoB-gyrB-hsp60; MALDI-TOF; CAMPYLOBACTER; IDENTIFICATION; BUTZLERI; DEFINITION; TAXONOMY; PROPOSAL;
D O I
10.1016/j.syapm.2012.11.003
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Three strains recovered from mussels (F26), sewage (SW28-13(T)) and pork meat (F41(T)) were characterized as Arcobacter. They did not appear to resemble any known species on the basis of their 16S rDNA-RFLP patterns and the rpoB gene analyses. However, strains F26 and SW28-13(T) appeared to be the same species. The 16S rRNA gene sequence similarity of strains SW28-13(T) and F41(T) to the type strains of all other Arcobacter species ranged from 94.1% to 99.6% and 93.4% to 98.8%, respectively. Phenotypic characteristics and the DNA-DNA hybridization (DDH) results showed that they belonged to 2 new Arcobacter species. A multilocus phylogenetic analysis (MLPA) with the concatenated sequences of 5 housekeeping genes (gyrA, atpA, rpoB, gyrB and hsp60) was used for the first time in the genus, showing concordance with the 16S rRNA gene phylogenetic analysis and DDH results. The MALDI-TOF mass spectra also discriminated these strains as two new species. The names proposed for them are Arcobacter cloacae with the type strain SW28-13(T) (=CECT 7834(T) = LMG 26153(T)) and Arcobacter suis with the type strain F41(T) (=CECT 7833(T) = LMG 26152(T)). (C) 2012 Elsevier GmbH. All rights reserved.
引用
收藏
页码:22 / 27
页数:6
相关论文
共 31 条
[11]   Arcobacter cibarius sp nov., isolated from broiler carcasses [J].
Houf, K ;
On, SLW ;
Coenye, T ;
Mast, J ;
Van Hoof, J ;
Vandamme, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :713-717
[12]  
Houf K, 2000, FEMS MICROBIOL LETT, V193, P89, DOI 10.1111/j.1574-6968.2000.tb09407.x
[13]   Arcobacter thereius sp nov., isolated from pigs and ducks [J].
Houf, Kurt ;
On, Stephen L. W. ;
Coenye, Tom ;
Debruyne, Lies ;
De Smet, Sarah ;
Vandamme, Peter .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 :2599-2604
[14]   A new 16S rDNA-RFLP method for the discrimination of the accepted species of Arcobacter [J].
Jose Figueras, Maria ;
Collado, Luis ;
Guarro, Josep .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2008, 62 (01) :11-15
[15]   Arcobacter ellisii sp nov., isolated from mussels [J].
Jose Figueras, Maria ;
Levican, Arturo ;
Collado, Luis ;
Isabel Inza, Maria ;
Yustes, Clara .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2011, 34 (06) :414-418
[16]   Arcobacter molluscorum sp nov., a new species isolated from shellfish [J].
Jose Figueras, Maria ;
Collado, Luis ;
Levican, Arturo ;
Perez, Jessica ;
Josep Solsona, Maria ;
Yustes, Clara .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2011, 34 (02) :105-109
[17]   CAMPYLOBACTER-BUTZLERI SP-NOV ISOLATED FROM HUMANS AND ANIMALS WITH DIARRHEAL ILLNESS [J].
KIEHLBAUCH, JA ;
BRENNER, DJ ;
NICHOLSON, MA ;
BAKER, CN ;
PATTON, CM ;
STEIGERWALT, AG ;
WACHSMUTH, IK .
JOURNAL OF CLINICAL MICROBIOLOGY, 1991, 29 (02) :376-385
[18]   Arcobacter marinus sp nov. [J].
Kim, Hye Min ;
Hwang, Chung Yeon ;
Cho, Byung Cheol .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 :531-536
[19]   Clustal W and clustal X version 2.0 [J].
Larkin, M. A. ;
Blackshields, G. ;
Brown, N. P. ;
Chenna, R. ;
McGettigan, P. A. ;
McWilliam, H. ;
Valentin, F. ;
Wallace, I. M. ;
Wilm, A. ;
Lopez, R. ;
Thompson, J. D. ;
Gibson, T. J. ;
Higgins, D. G. .
BIOINFORMATICS, 2007, 23 (21) :2947-2948
[20]   Arcobacter bivalviorum sp nov and Arcobacter venerupis sp nov., new species isolated from shellfish [J].
Levican, Arturo ;
Collado, Luis ;
Aguilar, Carmen ;
Yustes, Clara ;
Dieguez, Ana L. ;
Romalde, Jesus L. ;
Figueras, Maria Jose .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2012, 35 (03) :133-138