Accurate Segmentation of Cervical Cytoplasm and Nuclei Based on Multiscale Convolutional Network and Graph Partitioning

被引:203
作者
Song, Youyi [1 ]
Zhang, Ling [1 ]
Chen, Siping [1 ]
Ni, Dong [1 ]
Lei, Baiying [2 ]
Wang, Tianfu [2 ]
机构
[1] Shenzhen Univ, Shenzhen 518060, Peoples R China
[2] Shenzhen Univ, Sch Med, Dept Biomed Engn,Natl Reg Key Technol Engn Lab Me, Guangdong Key Lab Biomed Measurements & Ultrasoun, Shenzhen 518060, Peoples R China
基金
中国国家自然科学基金;
关键词
Cervical segmentation; coarse to fine; graph partitioning; multiscale convolutional network (MSCN); touching-cell splitting; CELL-NUCLEI; ENERGY MINIMIZATION; CONTOUR DETECTOR; IMAGES; ALGORITHM; CYTOLOGY; CLASSIFICATION; RESOLUTION;
D O I
10.1109/TBME.2015.2430895
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
In this paper, a multiscale convolutional network (MSCN) and graph-partitioning-based method is proposed for accurate segmentation of cervical cytoplasm and nuclei. Specifically, deep learning via the MSCN is explored to extract scale invariant features, and then, segment regions centered at each pixel. The coarse segmentation is refined by an automated graph partitioning method based on the pretrained feature. The texture, shape, and contextual information of the target objects are learned to localize the appearance of distinctive boundary, which is also explored to generate markers to split the touching nuclei. For further refinement of the segmentation, a coarse-to-fine nucleus segmentation framework is developed. The computational complexity of the segmentation is reduced by using superpixel instead of raw pixels. Extensive experimental results demonstrate that the proposed cervical nucleus cell segmentation delivers promising results and outperforms existing methods.
引用
收藏
页码:2421 / 2433
页数:13
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