Automated Infarct Segmentation from Follow-up Non-Contrast CT Scans in Patients with Acute Ischemic Stroke Using Dense Multi-Path Contextual Generative Adversarial Network

被引:15
作者
Kuang, Hulin [1 ]
Menon, Bijoy K. [1 ]
Qiu, Wu [1 ]
机构
[1] Univ Calgary, Dept Clin Neurosci, Calgary, AB, Canada
来源
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2019, PT III | 2019年 / 11766卷
关键词
Infarct segmentation; Non-contrast CT; Acute ischemic stroke; Generative adversarial network; Deep learning;
D O I
10.1007/978-3-030-32248-9_95
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Cerebral infarct volume measured in follow-up non-contrast CT (NCCT) scans is an important radiologic outcome measure evaluating the effectiveness of endovascular therapy of acute ischemic stroke (AIS) patients. In this paper, a dense Multi-Path Contextual Generative Adversarial Network (MPC-GAN) is proposed to automatically segment ischemic infarct volume from NCCT images of AIS patients. The developed MPC-GAN approach makes use of a dense multi-path U-Net as generator regularized by a discriminator network. Both generator and discriminator take contextual information as inputs, such as bilateral intensity difference, infarct location probability, and distance to cerebrospinal fluid (CSF). We collected 100 NCCT images with manual segmentations. Of 100 patients, 60 patients were used to train the MPC-GAN, 10 patients were used to tune the parameters, and the remained 30 patients were used for validation. Quantitative results in comparison with manual segmentations show that the proposed MPC-GAN achieved a dice coefficient (DC) of 72.6%, outperforming some state-of-the-art segmentation methods, such as U-Net, U-Net based GAN, and random forest based segmentation method.
引用
收藏
页码:856 / 863
页数:8
相关论文
共 13 条
[1]   Automated Cerebral Infarct Volume Measurement in Follow-up Noncontrast CT Scans of Patients with Acute Ischemic Stroke [J].
Boers, A. M. ;
Marquering, H. A. ;
Jochem, J. J. ;
Besselink, N. J. ;
Berkhemer, O. A. ;
van der Lugt, A. ;
Beenen, L. F. ;
Majoie, C. B. .
AMERICAN JOURNAL OF NEURORADIOLOGY, 2013, 34 (08) :1522-1527
[2]   Mediation of the Relationship Between Endovascular Therapy and Functional Outcome by Follow-up Infarct Volume in Patients With Acute Ischemic Stroke [J].
Boers, Anna M. M. ;
Jansen, Ivo G. H. ;
Brown, Scott ;
Lingsma, Hester F. ;
Beenen, Ludo F. M. ;
Devlin, Thomas G. ;
San Roman, Luis ;
Heo, Ji-Hoe ;
Ribo, Marc ;
Almekhlafi, Mohammed A. ;
Liebeskind, David S. ;
Teitelbaum, Jeanne ;
Cuadras, Patricia ;
de Rochemont, Richard du Mesnil ;
Beaumont, Marine ;
Brown, Martin M. ;
Yoo, Albert J. ;
Donnan, Geoffrey A. ;
Mas, Jean Louis ;
Oppenheim, Catherine ;
Dowling, Richard J. ;
Moulin, Thierry ;
Agrinier, Nelly ;
Lopes, Demetrius K. ;
Aja Rodriguez, Lucia ;
Compagne, Kars C. J. ;
Al-Ajlan, Fahad S. ;
Madigan, Jeremy ;
Albers, Gregory W. ;
Soize, Sebastien ;
Blasco, Jordi ;
Davis, Stephen M. ;
Nogueira, Raul G. ;
Davalos, Antoni ;
Menon, Bijoy K. ;
van der Lugt, Aad ;
Muir, Keith W. ;
Roos, Yvo B. W. E. M. ;
White, Phil ;
Mitchell, Peter J. ;
Demchuk, Andrew M. ;
van Zwam, Wim H. ;
Jovin, Tudor G. ;
van Oostenbrugge, Robert J. ;
Dippel, Diederik W. J. ;
Campbell, Bruce C. V. ;
Guillemin, Francis ;
Bracard, Serge ;
Hill, Michael D. ;
Goyal, Mayank .
JAMA NEUROLOGY, 2019, 76 (02) :194-202
[3]   Fast semi-automated lesion demarcation in stroke [J].
de Haan, Bianca ;
Clas, Philipp ;
Juenger, Hendrik ;
Wilke, Marko ;
Karnath, Hans-Otto .
NEUROIMAGE-CLINICAL, 2015, 9 :69-74
[4]   Automated delineation of stroke lesions using brain CT images [J].
Gillebert, Celine R. ;
Humphreys, Glyn W. ;
Mantini, Dante .
NEUROIMAGE-CLINICAL, 2014, 4 :540-548
[5]  
Goodfellow IJ, 2014, ADV NEUR IN, V27, P2672
[6]   Randomized Assessment of Rapid Endovascular Treatment of Ischemic Stroke [J].
Goyal, M. ;
Demchuk, A. M. ;
Menon, B. K. ;
Eesa, M. ;
Rempel, J. L. ;
Thornton, J. ;
Roy, D. ;
Jovin, T. G. ;
Willinsky, R. A. ;
Sapkota, B. L. ;
Dowlatshahi, D. ;
Frei, D. F. ;
Kamal, N. R. ;
Montanera, W. J. ;
Poppe, A. Y. ;
Ryckborst, K. J. ;
Silver, F. L. ;
Shuaib, A. ;
Tampieri, D. ;
Williams, D. ;
Bang, O. Y. ;
Baxter, B. W. ;
Burns, P. A. ;
Choe, H. ;
Heo, J. -H. ;
Holmstedt, C. A. ;
Jankowitz, B. ;
Kelly, M. ;
Linares, G. ;
Mandzia, J. L. ;
Shankar, J. ;
Sohn, S. -I. ;
Swartz, R. H. ;
Barber, P. A. ;
Coutts, S. B. ;
Smith, E. E. ;
Morrish, W. F. ;
Weill, A. ;
Subramaniam, S. ;
Mitha, A. P. ;
Wong, J. H. ;
Lowerison, M. W. ;
Sajobi, T. T. ;
Hill, M. D. .
NEW ENGLAND JOURNAL OF MEDICINE, 2015, 372 (11) :1019-1030
[7]  
Kervadec Hoel., 2018, Boundary loss for highly unbalanced segmentation
[8]   Segmenting Hemorrhagic and Ischemic Infarct Simultaneously From Follow-Up Non-Contrast CT Images in Patients With Acute Ischemic Stroke [J].
Kuang, Hulin ;
Menon, Buoy K. ;
Qiu, Wu .
IEEE ACCESS, 2019, 7 :39842-39851
[9]   Joint Segmentation of Intracerebral Hemorrhage and Infarct from Non-Contrast CT Images of Post-treatment Acute Ischemic Stroke Patients [J].
Kuang, Hulin ;
Najm, Mohamed ;
Menon, Bijoy K. ;
Qiu, Wu .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION, PT III, 2018, 11072 :681-688
[10]   Automatic segmentation approach to extracting neonatal cerebral ventricles from 3D ultrasound images [J].
Qiu, Wu ;
Chen, Yimin ;
Kishimoto, Jessica ;
de Ribaupierre, Sandrine ;
Chiu, Bernard ;
Fenster, Aaron ;
Yuan, Jing .
MEDICAL IMAGE ANALYSIS, 2017, 35 :181-191