A Network Medicine Approach for Drug Repurposing in Duchenne Muscular Dystrophy

被引:6
|
作者
Lombardo, Salvo Danilo [1 ]
Basile, Maria Sofia [2 ]
Ciurleo, Rosella [2 ]
Bramanti, Alessia [2 ]
Arcidiacono, Antonio [3 ]
Mangano, Katia [3 ]
Bramanti, Placido [2 ]
Nicoletti, Ferdinando [3 ]
Fagone, Paolo [3 ]
机构
[1] Univ Vienna, Max Perutz Labs, Dept Struct & Computat Biol, A-1010 Vienna, Austria
[2] IRCCS Ctr Neurolesi Bonino Pulejo, Via Prov Palermo, I-98124 Messina, Italy
[3] Univ Catania, Dept Biomed & Biotechnol Sci, Via S Sofia 89, I-95123 Catania, Italy
关键词
Duchenne muscular dystrophy; microarray analysis; network medicine; protein– protein interactions; drug discovery; drug repurposing; computational biology; MUSCLE; DMD; MUTATIONS; PATHWAYS; MYOPATHY; DATABASE;
D O I
10.3390/genes12040543
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Duchenne muscular dystrophy (DMD) is a progressive hereditary muscular disease caused by a lack of dystrophin, leading to membrane instability, cell damage, and inflammatory response. However, gene-editing alone is not enough to restore the healthy phenotype and additional treatments are required. In the present study, we have first conducted a meta-analysis of three microarray datasets, GSE38417, GSE3307, and GSE6011, to identify the differentially expressed genes (DEGs) between healthy donors and DMD patients. We have then integrated this analysis with the knowledge obtained from DisGeNET and DIAMOnD, a well-known algorithm for drug-gene association discoveries in the human interactome. The data obtained allowed us to identify novel possible target genes and were used to predict potential therapeutical options that could reverse the pathological condition.
引用
收藏
页数:16
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