Cloning and Transcript Analysis of Multiple Genes Encoding the Glycoside Hydrolase Family 6 Enzyme from Coprinopsis cinerea

被引:16
|
作者
Yoshida, Makoto [1 ]
Sato, Kan [2 ]
Kaneko, Satoshi [3 ]
Fukuda, Kiyoharu [1 ]
机构
[1] Tokyo Univ Agr & Technol, Fac Agr, Dept Environm & Nat Resource Sci, Fuchu, Tokyo 1838509, Japan
[2] Tokyo Univ Agr & Technol, Fac Agr, Dept Biol Prod, Fuchu, Tokyo 1838509, Japan
[3] Natl Food Res Inst, Food Biotechnol Div, Tsukuba, Ibaraki 3058642, Japan
关键词
Coprinopsis cinerea; glycoside hydrolase family 6; cellulose degradation; basidiomycete; PHANEROCHAETE-CHRYSOSPORIUM; TRICHODERMA-REESEI; CELLOBIOHYDROLASE-I; CELLULASE GENE; DIFFERENTIAL EXPRESSION; MOLECULAR-CLONING; COPRINUS-CINEREUS; CRYSTAL-STRUCTURE; DEGRADATION; IDENTIFICATION;
D O I
10.1271/bbb.80477
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We searched the genome database of the basidiomycete Coprinopsis cinerea (Coprinus cinerea) and found five genes encoding the glycoside hydrolase family 6 (GH6) enzyme, CcCel6A, CcCel6B, CcCel6C, CcCel6D, and CcCel6E, designated in order of increasing locus number (CC1G_01107.1, CC1G_04166.1, CC1G_08276.1, CC1G_08277.1, and CC1G_10605.1). The amino acid sequence of CeCel6A suggests a two-domain structure consisting of an N-terminal family I carbohydrate-binding module (CBM1) and a GH6 catalytic domain, while the other genes lack CBM1. The transcripts of CcCel6A were observed at the active growth stage in cellulose culture, whereas they were absent from glucose culture. Cellobiose strongly induced transcription of CcCel6A. On the other hand, transcripts of CcCe16B, -D, and -E were detected in both glucose and cellulose cultures, and transcription of them was induced weakly by cellobiose. The transcript level of CcCel6C was not influenced by glucose or cellobiose.
引用
收藏
页码:67 / 73
页数:7
相关论文
共 50 条
  • [21] Analysis of the Glycoside Hydrolase Family 1 from Wild Jujube Reveals Genes Involved in the Degradation of Jujuboside A
    Yang, Mingjun
    Ma, Yimian
    Si, Xupeng
    Liu, Xiaofeng
    Geng, Xin
    Wen, Xin
    Li, Guoqiong
    Zhang, Liping
    Yang, Chengmin
    Zhang, Zheng
    GENES, 2023, 14 (06)
  • [22] Cloning, Heterologous Expression, and Biochemical Characterization of a Novel Glycoside Hydrolase 16 Family Enzyme for Biorefinery of Furcellaria lumbricalis
    Ning, Limin
    Wei, Yanshang
    Guo, Zilong
    APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2025, : 2312 - 2327
  • [23] Genome-wide analysis of carbohydrate-active enzyme coding genes in Phytophthora infestans:: The glycoside hydrolase gene family
    Griffith, J. J.
    Jones, R. W.
    Ospina-Giraldo, M. D.
    PHYTOPATHOLOGY, 2008, 98 (06) : S61 - S62
  • [24] Arabinoxylanase from glycoside hydrolase family 5 is a selective enzyme for production of specific arabinoxylooligosaccharides
    Falck, Peter
    Linares-Pasten, Javier A.
    Karlsson, Eva Nordberg
    Adlercreutz, Patrick
    FOOD CHEMISTRY, 2018, 242 : 579 - 584
  • [25] Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57
    Blesak, Karol
    Janecek, Stefan
    EXTREMOPHILES, 2012, 16 (03) : 497 - 506
  • [26] Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57
    Karol Blesák
    Štefan Janeček
    Extremophiles, 2012, 16 : 497 - 506
  • [27] Real-time PCR for quantification in soil of glycoside hydrolase family 6 cellulase genes
    Merlin, C.
    Besaury, L.
    Niepceron, M.
    Mchergui, C.
    Riah, W.
    Bureau, F.
    Gattin, I.
    Bodilis, J.
    LETTERS IN APPLIED MICROBIOLOGY, 2014, 59 (03) : 284 - 291
  • [28] Cloning, expression, and characterization of a glycoside hydrolase family 50 β-agarase from a marine Agarivorans isolate
    Lee, Dong-Geun
    Park, Geun-Tae
    Kim, Nam Young
    Lee, Eo-Jin
    Jang, Min Kyung
    Shin, Young Gyun
    Park, Gwang-Seok
    Kim, Tae-Min
    Lee, Jae-Hwa
    Lee, Jung-Hyun
    Kim, Sang-Jin
    Lee, Sang-Hyeon
    BIOTECHNOLOGY LETTERS, 2006, 28 (23) : 1925 - 1932
  • [29] Cloning, expression, and characterization of a glycoside hydrolase family 50 β-agarase from a marine Agarivorans isolate
    Dong-Geun Lee
    Geun-Tae Park
    Nam Young Kim
    Eo-Jin Lee
    Min Kyung Jang
    Young Gyun Shin
    Gwang-Seok Park
    Tae-Min Kim
    Jae-Hwa Lee
    Jung-Hyun Lee
    Sang-Jin Kim
    Sang-Hyeon Lee
    Biotechnology Letters, 2006, 28 : 1925 - 1932
  • [30] Cloning, expression and characterization of glycoside hydrolase family 11 endoxylanase from Bacillus pumilus ARA
    Qu, Wei
    Shao, Weilan
    BIOTECHNOLOGY LETTERS, 2011, 33 (07) : 1407 - 1416