Relating human genetic variation to variation in drug responses

被引:59
作者
Median, Ashraf G. [1 ]
Wheeler, Heather E. [2 ]
Jones, Richard Baker [1 ,3 ,4 ]
Dolan, M. Eileen [1 ,2 ,3 ]
机构
[1] Univ Chicago, Comm Clin Pharmacol & Pharmacogen, Chicago, IL 60637 USA
[2] Univ Chicago, Dept Med, Chicago, IL 60637 USA
[3] Univ Chicago, Ben May Dept Canc Res, Chicago, IL 60637 USA
[4] Univ Chicago, Inst Genom & Syst Biol, Chicago, IL 60637 USA
关键词
pharmacogenomics; genome-wide association studies; next-generation sequencing; 1000 genome project; personalized medicine; GENOME-WIDE ASSOCIATION; PHARMACOGENETICS IMPLEMENTATION CONSORTIUM; CYTOCHROME-P450; 2C19; GENOTYPE; INDUCED LIVER-INJURY; CYP2C19; PERSONALIZED MEDICINE; PEGYLATED INTERFERON; RIBAVIRIN THERAPY; CELL-LINES; CLOPIDOGREL;
D O I
10.1016/j.tig.2012.06.008
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Although sequencing a single human genome was a monumental effort a decade ago, more than 1000 genomes have now been sequenced. The task ahead lies in transforming this information into personalized treatment strategies that are tailored to the unique genetics of each individual. One important aspect of personalized medicine is patient-to-patient variation in drug response. Pharmacogenomics addresses this issue by seeking to identify genetic contributors to human variation in drug efficacy and toxicity. Here, we present a summary of the current status of this field, which has evolved from studies of single candidate genes to comprehensive genome-wide analyses. Additionally, we discuss the major challenges in translating this knowledge into a systems-level understanding of drug physiology, with the ultimate goal of developing more effective personalized clinical treatment strategies.
引用
收藏
页码:487 / 495
页数:9
相关论文
共 102 条
[81]   Genome-wide association of IL28B with response to pegylated interferon-α and ribavirin therapy for chronic hepatitis C [J].
Tanaka, Yasuhito ;
Nishida, Nao ;
Sugiyama, Masaya ;
Kurosaki, Masayuki ;
Matsuura, Kentaro ;
Sakamoto, Naoya ;
Nakagawa, Mina ;
Korenaga, Masaaki ;
Hino, Keisuke ;
Hige, Shuhei ;
Ito, Yoshito ;
Mita, Eiji ;
Tanaka, Eiji ;
Mochida, Satoshi ;
Murawaki, Yoshikazu ;
Honda, Masao ;
Sakai, Akito ;
Hiasa, Yoichi ;
Nishiguchi, Shuhei ;
Koike, Asako ;
Sakaida, Isao ;
Imamura, Masatoshi ;
Ito, Kiyoaki ;
Yano, Koji ;
Masaki, Naohiko ;
Sugauchi, Fuminaka ;
Izumi, Namiki ;
Tokunaga, Katsushi ;
Mizokami, Masashi .
NATURE GENETICS, 2009, 41 (10) :1105-U81
[82]   Genome-wide Association Identifies the T Gene as a Novel Asthma Pharmacogenetic Locus [J].
Tantisira, Kelan G. ;
Damask, Amy ;
Szefler, Stanley J. ;
Schuemann, Brooke ;
Markezich, Amy ;
Su, Jessica ;
Klanderman, Barbara ;
Sylvia, Jody ;
Wu, Rongling ;
Martinez, Fernando ;
Boushey, Homer A. ;
Chinchilli, Vernon M. ;
Mauger, Dave ;
Weiss, Scott T. ;
Israel, Elliot .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2012, 185 (12) :1286-1291
[83]   Genomewide Association between GLCCI1 and Response to Glucocorticoid Therapy in Asthma [J].
Tantisira, Kelan G. ;
Lasky-Su, Jessica ;
Harada, Michishige ;
Murphy, Amy ;
Litonjua, Augusto A. ;
Himes, Blanca E. ;
Lange, Christoph ;
Lazarus, Ross ;
Sylvia, Jody ;
Klanderman, Barbara ;
Duan, Qing Ling ;
Qiu, Weiliang ;
Hirota, Tomomitsu ;
Martinez, Fernando D. ;
Mauger, David ;
Sorkness, Christine ;
Szefler, Stanley ;
Lazarus, Stephen C. ;
Lemanske, Robert F., Jr. ;
Peters, Stephen P. ;
Lima, John J. ;
Nakamura, Yusuke ;
Tamari, Mayumi ;
Weiss, Scott T. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 365 (13) :1173-1183
[84]   First Analysis of the Relation Between CYP2C19 Genotype and Pharmacodynamics in Patients Treated With Ticagrelor Versus Clopidogrel The ONSET/OFFSET and RESPOND Genotype Studies [J].
Tantry, Udaya S. ;
Bliden, Kevin P. ;
Wei, Cheryl ;
Storey, Robert F. ;
Armstrong, Martin ;
Butler, Kathleen ;
Gurbel, Paul A. .
CIRCULATION-CARDIOVASCULAR GENETICS, 2010, 3 (06) :556-566
[85]   An integrative method for scoring candidate genes from association studies: application to warfarin dosing [J].
Tatonetti, Nicholas P. ;
Dudley, Joel T. ;
Sagreiya, Hersh ;
Butte, Atul J. ;
Altman, Russ B. .
BMC BIOINFORMATICS, 2010, 11
[86]  
Tohkin M., 2011, PHARMACOGENOMICS J
[87]   Statin-induced myopathies [J].
Tomaszewski, Michal ;
Stepien, Karolina M. ;
Tomaszewska, Joanna ;
Czuczwar, Stanislaw J. .
PHARMACOLOGICAL REPORTS, 2011, 63 (04) :859-866
[88]   Pharmacogenomics and personalized medicine: the plunge into next-generation sequencing [J].
Wadelius, Mia ;
Alfirevic, Ana .
GENOME MEDICINE, 2011, 3
[89]  
WEINSHILBOUM RM, 1980, AM J HUM GENET, V32, P651
[90]   Pharmacogenomic Discovery Using Cell-Based Models [J].
Welsh, Marleen ;
Mangravite, Lara ;
Medina, Marisa Wong ;
Tantisira, Kelan ;
Zhang, Wei ;
Huang, R. Stephanie ;
McLeod, Howard ;
Dolan, M. Eileen .
PHARMACOLOGICAL REVIEWS, 2009, 61 (04) :413-429